Oceanidesulfovibrio marinus: E8L03_11815
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Entry
E8L03_11815 CDS
T06743
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E8L03_11815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dms02000
]
E8L03_11815
Transporters [BR:
dms02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E8L03_11815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
QJT11314
LinkDB
All DBs
Position
complement(2685437..2687443)
Genome browser
AA seq
668 aa
AA seq
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MFGANVSTAHAAKTCPAATVADDMGITGEFPEQYELSEFTQGGCEMAYAENPEIAKLNAE
IIGNPDLPPVAERLPQEPLVIAPYEAIGTYGGVLHGLSKGTESGTSDLLSIRHVNLVRYA
DDLKTVVPNVAKSWSWNDDYTVLTFTLRKGHKWSDGEPFTAEDVAFWYNDLILNPDVYEK
TPDRWLFDGKPMKVEATDETTVVMSFPVPSPGILNRFAVDFGQPFQPKHFLKQFMPKYNP
DADTLAKEKGLKDAAELLSKYYSGSDWKDVPTPLLSGFDTQVVPTLEAFIVVADTATGRR
CVANPYFHMVDTAGNQLPYINVIDEQYVKDKEVQNLKITNGEVTFKEQAIFIEDYPLLKD
NESKGDYAIDLAPTLGENIFYAFNTTDKDEELRKIFNDLRFRQAMSVAINRDEINELVFF
GQGVPMQATPAEPETVNFVSDENKNAFIEYDPAAAKELLAGMGLKDSDGDGILERFDGKP
LVVRLIYSNQGAPVKIHELVRDYWGKVGVRIDLKEVTSDEYRAAANNNDLDLTTWKNDGS
AAPAISQDVTAMIPPFGDYFNPGTGFGWAAWKTSDGKDGIEPPADVMELYELTDKFLQQP
IGTPGSDAIGKEIVDIHVKNLWKIGTVGNTKGPVMHSNSLGNFHPFKAKSYDYYWTYPYR
GFQWFIKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgttcggggcgaatgtgtccaccgcccatgcggcaaagacctgcccggctgcaaccgtg
gccgacgacatgggcatcaccggcgagttcccggagcagtatgagctctccgagttcacg
cagggcggctgcgagatggcctatgccgaaaacccggaaatcgccaagttgaatgccgag
atcatcggcaaccccgatcttccccccgtggccgagcgcctgccccaggagcccctggtc
atcgccccgtacgaggccatcggcacttacggcggcgtgctgcacggcctgtccaagggc
acggagtccggcacctcggaccttctgtccatccgccatgtcaacctggtgcgctacgcc
gacgacctgaagaccgtggtgcccaacgtggccaagtcgtggagctggaacgacgactac
accgtgctcaccttcacgctacgcaagggccacaagtggtctgacggcgagcccttcacg
gccgaggacgtggccttctggtacaacgatttgatccttaaccccgacgtctatgagaag
actccggaccgctggctctttgacggcaagcccatgaaggtggaggccacggacgagacc
accgtggtgatgagcttcccggttcccagccccggcattctcaaccgcttcgccgtggac
ttcggccagcccttccagcccaagcatttccttaagcagttcatgcccaagtacaatccg
gacgcggacacgctggccaaggagaagggcctgaaggacgcggccgaactgctctccaag
tactactccggctccgactggaaggacgtgcccaccccgctgctctccggcttcgacacc
caggtggtgcccaccctggaggccttcatcgtggttgcggacaccgccaccggccgccgc
tgcgtggccaacccgtacttccacatggtggatacggccggcaaccagcttccctacatc
aacgtcatcgacgagcagtacgtgaaggacaaggaggtccagaacctgaagatcaccaac
ggcgaggtgactttcaaggagcaggccatcttcatcgaggattacccgctgctcaaggac
aacgagtccaagggcgactacgccatcgatctggcccccaccctgggcgagaacatcttc
tatgccttcaacaccacggacaaggacgaggagctgcgcaagatattcaacgacctccgt
ttccgccaagccatgtccgtggccatcaaccgcgacgagatcaacgagttggtcttcttc
ggccagggcgtgcccatgcaggccaccccggcggagcccgagaccgtgaacttcgtctct
gacgagaacaagaacgccttcatcgagtacgacccggccgccgccaaggagctgctggca
ggcatgggcctcaaggactccgacggcgacggcattctggagcgctttgacggcaagccc
ctggtcgtccgcctgatctactccaaccagggcgccccggtgaagatccacgagctggtg
cgcgactactggggcaaggtgggcgtgcgcatcgatctcaaggaggtcacctccgacgag
tatcgcgccgcggccaacaacaatgacctcgatctgaccacctggaagaacgacggctcg
gccgcgccggccatctcccaggacgtcaccgccatgatcccgcccttcggcgactacttc
aaccccggcaccggctttggctgggccgcctggaagacctccgacggcaaggacggcatc
gagcccccggccgacgtgatggagctctacgaactgaccgacaagttcctgcagcagccc
atcggcacgcccgggtccgacgccatcggcaaggagatcgtggacatccacgtcaagaac
ctctggaagatcggcacggtgggcaacaccaagggtccggtcatgcacagcaactcgctg
ggcaacttccacccgttcaaagccaagagctacgactactactggacctacccctaccgc
gggttccagtggttcatcaaaaagtaa
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