Oceanidesulfovibrio marinus: E8L03_15130
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Entry
E8L03_15130 CDS
T06743
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dms
Oceanidesulfovibrio marinus
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dms03009
]
E8L03_15130 (rimO)
Enzymes [BR:
dms01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E8L03_15130 (rimO)
Ribosome biogenesis [BR:
dms03009
]
Prokaryotic type
ribosomal protein modification factors
E8L03_15130 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QJT10181
LinkDB
All DBs
Position
3429480..3430874
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AA seq
464 aa
AA seq
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MDHPIRVHVTSLGCPKNTVDTERLVGALSPGMELTPHPDDADLILVNTCAFIHPAVEESI
ETILELVRTAEEENPTAVVAVAGCLVQRYGADELAAEMPEVDLWLVPDDWPRWHGLVLAA
VEARRAGGLFKFAGGQSDAADTVGALDLKPGSLRSLSTTAGHAYLKVSEGCDHACGFCTI
PSIKGPHVSFDADALVAEAEALVAGRHGPPVKELVLVGQDLTAWGRTGGTGSKSLTALLE
RLLKINGLTWLRTMYLYPAGLDERLLDFYRANADPQGTLLPYFDIPLQHAHPDILRRMGR
PFSGDPMRVVERVRAKVPESVLRTTFIVGYPGEEEQHFEALEQFVREVRFQHLGVFPYWP
EEGTPAAAMENQVEDAVKQERLARLMSMQAEISAELLEAYVDEEMDVLVDDMVPDWPGLH
RGRVWLQAPDVDGVTYISGKGVHPGVVVKALVEDSKTYDLVALS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccccatacgagttcatgtcacgagcctcggttgtccgaaaaacaccgtggac
acggagcggctggtgggcgccctctcgccgggaatggagctcacgccccatcctgacgac
gccgacctcatcctggtgaacacctgcgccttcatccatccggccgtggaggagtccatc
gagacgattctggagctggtgcgcacggcagaggaggagaaccccacggccgtagtggcc
gtggccgggtgcctggtgcagcgctacggcgcagacgagctggccgccgagatgccggag
gtggatctgtggcttgttccggatgactggccgcgctggcacggcctggtccttgcggct
gtggaggcacgccgcgccggcggcctcttcaagttcgccggcgggcagagcgatgcggcg
gacacagtcggggctctggatctgaagccgggcagcctgcgctcgctctccaccacggcc
gggcatgcctatctgaaggtgagcgaaggctgcgaccacgcctgcggtttctgcaccatc
ccgtccatcaaggggccgcatgtgagcttcgacgccgacgccctggtggccgaggccgag
gccctggtcgccggcaggcacggaccgccggtcaaggagctcgtgctcgtgggccaggat
ctcacggcctggggtcggaccgggggtacgggctcgaaatctctgacggcgctgctggag
cgcctactgaagatcaacggcctgacctggctgcggaccatgtatctctacccggccggg
ctggacgagcggctgctggacttctacagggccaacgccgatccgcagggaaccctgctg
ccgtacttcgacattccgctgcagcatgcgcatccggatatcctgcgcaggatggggcgg
ccgttctccggcgatcccatgcgcgtggtggagcgggtgcgcgccaaggtgccggaatcg
gtgctgcgcaccacgttcatcgtgggctatcccggcgaggaggagcagcacttcgaggcg
ctggagcagtttgtgcgcgaggtgcgcttccagcatctgggggtgttcccctactggccg
gaggagggcacgccggcggcggccatggagaaccaggtggaggacgcggtgaagcaggag
cggctcgcgcggctcatgagcatgcaggcggagatcagcgcggagctgctggaggcttac
gtggacgaggagatggacgtgctggtggacgacatggtgccggactggccgggtctgcac
cggggccgggtgtggctgcaggcgccggatgtggatggggttacctatatctccggtaag
ggagttcatccgggagtcgtagtcaaagcgctggtggaagactcgaaaacctacgatcta
gtagcgctgtcttga
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