KEGG   Oceanidesulfovibrio marinus: E8L03_15650
Entry
E8L03_15650       CDS       T06743                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
dms  Oceanidesulfovibrio marinus
Brite
KEGG Orthology (KO) [BR:dms00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dms02048]
    E8L03_15650 (cas8c)
Prokaryotic defense system [BR:dms02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    E8L03_15650 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QJT10274
UniProt: A0ABX6NI11
LinkDB
Position
complement(3548943..3550814)
AA seq 623 aa
MILQALANYYDRLVKDPDQDVPEPGFSVQKIHAAIVLDKEGNLVAMNDIQQEETIPPKNK
KGKPKTRIVPKMVKVPFVEGRTSGVAAFFLWDNTGYVLGAQDKGKPDRIVKQFEAFRSLA
HEVLDGVEDEGAKAVLTFLDARESGQVNDIEKFDEKFIGKNCVFRLYGEPDRFIHDHPAV
RKAWLGHIDSTMERPTGVCLISGQVDEPQARIHPVLKGVRGAQTSGAYIVSFNASAFMSY
GKEFNDNAPVSERAAFAYTTALNHLLNAKTADHQRMLLGDATMVFWSETPTRMESVLQMF
IDPSAAGNDEGQEAHDGAVIGQLRAMLQAVRDGKEPPVATLLGDEPDTPFYVLGLAPNAS
RLAVRFWLVSTVADIAERLAQHFDDLAMETQFDFESEFPGIWRLVLELAPARPNAEGRYT
SKMDDVPPVYAGALARSVFTGETYPESIVNRILGRFRSDGRVTHGRMALLAAHHRRALRK
GRALSSNIQESEVKMSLNTESKNVGYRLGRLFAVLEKTQMEALGNVNATIKDRFFGSAMA
TPATVFPRLLDLGQKHIAKAEYGYVMDRHIAEIMEGFEVADGTPPFPAHLSSDDQVMFAL
GYYHQRNALWRKKETPQEATEAE
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgatcctccaggccctcgccaactactacgaccgtctggtgaaggacccggaccaggac
gtgcccgagcctggcttcagcgtgcagaagatccacgccgcgatcgtcctggacaaggag
ggaaacctcgtggcgatgaacgacatccagcaggaggagacgatcccgcccaagaacaag
aagggcaaacccaagaccaggatcgtgccgaagatggtgaaggtgccattcgtggagggc
aggacatccggtgttgcggcgtttttcctctgggacaacacgggctatgtgctcggcgcg
caggacaagggcaaaccggatcgcatcgtcaagcagttcgaggcgtttcgctctctcgct
cacgaggtgcttgatggtgtggaagacgaaggcgccaaggccgtactcacgttccttgat
gccagagaatccggccaggtcaacgacatcgagaagtttgatgaaaagttcatcggcaaa
aactgcgtctttcggctctatggcgaaccggaccgcttcattcacgaccatcctgccgtc
cgcaaagcatggctcggccacatcgacagcaccatggagagacccacaggggtctgtctc
atatctggccaagtggatgaaccgcaggcccgcatccaccctgtcctcaaaggcgtccgc
ggtgcacagacgtccggcgcgtacatcgtctccttcaacgcctctgctttcatgtcttac
ggcaaggagttcaacgacaacgccccggtctccgagcgcgcggcctttgcctacaccacg
gccctcaaccacctgctgaacgccaagacggcggatcaccagcgcatgctgctcggcgac
gccaccatggtcttctggtccgagacgccgacccgtatggaaagcgtgctccagatgttc
atcgatccgagcgcagccgggaacgacgagggccaggaggcgcacgacggcgccgtcatc
ggccagctccgcgccatgctccaggccgtacgcgacggcaaggagcctcctgtcgccacc
ctgctcggtgatgagccggacacccccttctacgtgctggggcttgcgcccaacgccagc
cgtctggccgtgcgcttctggctcgtatccaccgtggccgacatcgcagagcgcctggcc
cagcatttcgacgacctggccatggaaacgcagttcgacttcgagtccgagtttcccggc
atctggcgactcgtgctggagctcgctccggcccgccccaatgccgagggccgctacacc
agcaagatggacgacgtccccccggtttacgccggcgctttggcgcgcagcgtctttacc
ggcgagacgtatccggaaagcatcgtcaaccgcatcctcggccgcttccgcagcgacggc
cgcgtgacccacggccgtatggccctgcttgccgcgcaccaccgtcgcgccctgcgcaaa
ggccgcgcgctcagctcgaacattcaagaatcggaggtcaaaatgtccctcaatacagag
agcaagaacgtgggctaccgcctgggccggctcttcgccgtgctggaaaaaacccagatg
gaagccttgggcaacgtaaacgccaccatcaaggaccgcttctttggcagcgccatggcc
acgccggccacggtcttcccgcgcctgctggacctcggtcagaagcacattgccaaggcc
gagtacggctacgtcatggaccgccacatcgccgagatcatggaagggttcgaggttgcc
gatggcacgccgcctttcccggcgcacctctcctccgacgatcaggtcatgttcgcgctc
ggctactaccaccagcgcaacgccctgtggcgcaagaaggaaaccccgcaggaagcgacc
gaagccgaataa

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