Oceanidesulfovibrio marinus: E8L03_17495
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Entry
E8L03_17495 CDS
T06743
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dms
Oceanidesulfovibrio marinus
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dms03016
]
E8L03_17495 (truB)
Enzymes [BR:
dms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E8L03_17495 (truB)
Transfer RNA biogenesis [BR:
dms03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E8L03_17495 (truB)
Prokaryotic type
E8L03_17495 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QJT11399
UniProt:
A0ABX6NL40
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All DBs
Position
complement(3992224..3993135)
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AA seq
303 aa
AA seq
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MKPPQQDGVLVLHKPSGPTSTACLERIKRVLGQKKIGHAGTLDPLADGVLVVLLGQATKL
APYLTEGEKVYKGSLELGKATDTYDSQGQIVSTADWSQITEAEARAAVMAWLEDTSQIVP
PYSAAKHKGKALYALSREGKEVPEKRKEITISGVEVVSIDLPRIDFRVRCGAGTYIRSLV
HSLGMRLGCGAFMTALTREHSHPFDIAEAHTLDAVLDEPEALAERVLSMARSLPHWPRHT
LSEHDAALVKNGAQLDCGPEAEEADAMGRIMFLSPQGEALALAQKKERGGAMVWALLRGL
WRS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atcaagccgccgcagcaggacggcgtgctcgtactgcacaagccctccggtcccacgtcc
actgcgtgcctggagcgcatcaaacgcgtgctcgggcagaagaagatcggccacgcaggc
accctcgaccccctggccgacggcgtgcttgtcgtgttattgggccaggcaaccaagctt
gccccctatcttaccgaaggggaaaaggtgtataagggttccttggagctgggaaaggcc
accgatacgtatgactcccagggccagatcgtctccacggcggactggtcgcagataacg
gaggccgaggcccgcgcggcggtgatggcgtggctggaggacaccagccagatcgtcccg
ccctactccgcggccaagcataaaggcaaggcgctctacgcgctctcccgggaaggcaag
gaagtcccggaaaagcgcaaggagattacaatttcaggggtcgaggtcgtttccatagac
ctcccccgcatagatttccgggtgcgctgcggcgcaggcacgtatatccggtccctggtc
cacagcctggggatgcggttaggttgcggcgccttcatgacggcgctcacccgggagcac
agccaccccttcgacatcgccgaggcgcacacattggatgcggtcctcgacgagccggag
gccctggccgaacgggtcctttccatggcccgctctcttccccactggccgcggcacacg
ctctccgagcacgacgccgccctggtgaaaaatggcgcgcagcttgactgcggaccggaa
gcggaagaggcggacgccatgggacggatcatgttcctgtctccgcaaggagaggccctg
gccctggcgcagaagaaggaacggggtggcgcgatggtgtgggcgctgctgcgcggactc
tggcggtcctag
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