Oceanidesulfovibrio marinus: E8L03_20740
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Entry
E8L03_20740 CDS
T06743
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E8L03_20740 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_20740 (ruvB)
Enzymes [BR:
dms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E8L03_20740 (ruvB)
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E8L03_20740 (ruvB)
RecFOR pathway proteins
E8L03_20740 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
DUF815
AAA_3
AAA_22
AAA_16
nSTAND3
Mg_chelatase
RNA_helicase
TIP49
TsaE
AAA_14
AAA_28
AAA_17
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QJT11449
LinkDB
All DBs
Position
4759002..4759961
Genome browser
AA seq
319 aa
AA seq
DB search
MPGKAPGDETIRPQRLDDFIGQDDLRSNLSVYLQAARDRCQAMDHALFYGNPGLGKTTLA
QIMASELGVNIVPTSGPVLERGGDLAAILSNLGARDILFVDEIHRMPAAVEEILYPAMED
FKLDLVIGQGPAARTVKIDLEPFTLVGATTRLGLLTSPLRDRFGVILRLEFYAPDDLARI
VKRAAAILGINITDDGALEIGRRARGTPRIANRLLRRVRDFASVHGNGLVDAEAASQALG
RMDVDEHGLDQMDRKILEVIIHHYGGGPVGVKTIAVACSEEVRTIEEIYEPFLIQRGFIK
RTPRGRVATARAYKHLNIF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcaaggcgccgggcgacgagaccatccggccgcaacgattggacgatttcatc
ggccaggatgacctgcgctcgaacctctccgtctatctgcaggcggccagggatcgctgc
caggccatggaccatgcgctgttctatggcaacccgggcctgggcaagaccaccctggcg
cagatcatggcctcggagctgggcgtgaatatcgtgcccacctccggcccggtgctggag
cgcggcggcgatcttgcggccatcctctccaacctgggcgcgcgggacatcctgttcgtg
gatgagatccaccgcatgccggcggctgtcgaagagattctctacccggccatggaggac
ttcaagctcgacctggtcatcgggcaggggccggccgcacgcaccgtgaagatagatctg
gagcccttcaccctggtgggcgcaaccactcggctcggcctgctcacctcgccgctgcgc
gaccgcttcggcgttatcctgcggctggagttctacgcgccggacgatctggcgcgcatc
gtcaagcgcgcggccgccattctgggcatcaacatcacggacgacggcgcgctggagatc
ggccgccgggcgcggggaacgccgcgcatcgccaaccggctgctgcgccgggtgcgggac
ttcgccagcgtgcacggcaacggcctggtggacgccgaggcggcatcccaggccctggga
cgcatggacgtggacgagcacggcctggaccagatggatcgcaagatcctggaggtcatc
atccaccactacggtggcggccccgtgggcgtgaagaccattgccgtggcctgctccgag
gaagtgcggaccatcgaggaaatctacgagccgttcctcatccagcgcggattcatcaag
cgcacgccgcgcggccgggtggccacggcgcgcgcctacaagcacctgaacatattctag
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