Desulfitobacterium metallireducens: DESME_04540
Help
Entry
DESME_04540 CDS
T03599
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dmt
Desulfitobacterium metallireducens
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmt03019
]
DESME_04540
Messenger RNA biogenesis [BR:
dmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DESME_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HDOD
Cas3_HD
tRNA_anti-codon
TraI_2
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AHF06407
UniProt:
W0E6L6
LinkDB
All DBs
Position
908381..909310
Genome browser
AA seq
309 aa
AA seq
DB search
MIQDLKAGERYQGILLITDWKEATFRNKPGSYLILTCQDCTGSIGGKVWEMTAQMSHWLQ
EFDVFEMKGQVNEFRGNLELSIDSLQPVPEDKIELTELLQASPESAGELEKRLKTLVQEV
EDPYLNLLIKHILEDPKIGKAYRSCPAARKIHQAYLRGLWEHSVEVAELAASLASHYPEV
DRDLTITGALLHDLGKISEYEYARGIDVTTEGRLLGHIVLGIQMVTREIDMILGFPVELK
TKLMHILASHHGRYEWQSPKRPKIMEALLVHYADAMEAELWQFKHAKGAYSDSEWSPYLP
SMERYLYLK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagatctgaaggctggagaacgctatcagggaattcttttaattacggattgg
aaggaggccacctttcggaataaacccggcagttatcttattttaacctgccaggattgc
acaggcagtattgggggaaaagtctgggagatgacggcccaaatgagccactggcttcaa
gaattcgatgtttttgaaatgaaagggcaggttaatgaatttcgagggaatctggagcta
agcattgattcgcttcaacctgtacctgaggataaaattgagcttacagagcttctgcaa
gcttctcccgagtctgcaggggagctggagaagaggcttaaaacattggttcaagaggta
gaagatccctatttaaatcttttaatcaaacatatattagaggatccgaaaatcggaaaa
gcttatcgaagctgtcccgctgctcgaaagatccatcaggcgtacttgagagggttatgg
gagcatagcgttgaagttgcagaacttgctgcttcactcgcctctcattatccagaagtg
gaccgtgatctaactattacaggagcactgcttcatgatttgggaaaaataagcgaatat
gaatatgcacgaggcatagatgtgaccactgaaggacgattattgggacatatcgtactt
ggtattcagatggttactcgagagatagatatgatcctcggtttccctgtggagttgaag
accaagctgatgcatattttagcgagccatcatggacgatatgaatggcaatctccgaag
cgccctaagattatggaagcactcctggtgcattatgctgacgcaatggaggcagagctt
tggcaattcaagcatgccaaaggagcctattcagattctgagtggtccccttatttacca
agtatggaacggtatctgtacttaaaataa
DBGET
integrated database retrieval system
