Desulfitobacterium metallireducens: DESME_06715
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Entry
DESME_06715 CDS
T03599
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dmt
Desulfitobacterium metallireducens
Pathway
dmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DESME_06715
09124 Replication and repair
03420 Nucleotide excision repair
DESME_06715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmt03021
]
DESME_06715
03036 Chromosome and associated proteins [BR:
dmt03036
]
DESME_06715
03400 DNA repair and recombination proteins [BR:
dmt03400
]
DESME_06715
Enzymes [BR:
dmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DESME_06715
Transcription machinery [BR:
dmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DESME_06715
Chromosome and associated proteins [BR:
dmt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DESME_06715
DNA repair and recombination proteins [BR:
dmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DESME_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
PDDEXK_1
ResIII
Helicase_C
B
Motif
Other DBs
NCBI-ProteinID:
AHF06787
UniProt:
W0E7P7
LinkDB
All DBs
Position
1320185..1322500
Genome browser
AA seq
771 aa
AA seq
DB search
MRVSVRELVEFVLRSGDLQSTANGPSRTLEGIKAHQFIQKAYGQEYQPEVSLSYVYEQDD
RKLEIHGRADGIIQKESGICIDEIKSTTRNFEQWEESFSDIHWAQVKCYAYIYAFQVGLK
SIEVQLTYYQLNSGESQIFTRSYSIEDLEDFFIKVVDSYLQWAKKIESWTEARDLSIRSL
EFPYPSYRSGQRKLVIAVYKTIEQGKKLFAQAPTGIGKTIATLFPALKSLAEGLTSELFY
LTAKTMTRTVAEKALSDLQEQGLRIKRLTLTAKDKICFLPDSTCDPEECPYARGYYDRVR
LAVEEIFNEDSWNRAMIENYSRNHSVCPFEFSLDLTNWADVVICDYNYVFDPRVYLRRLF
LEGGDYLFLVDEAHNLVERAREMFSAEIVKEPFLKLKREVQTEFPLLGKKLQKVNAQLGK
LKKERAEDFQKDPPTGLYSSLQQFIKVAESFLREEKSVPWKDEFLDLYFKTLGFLRTAEY
YDERYNTLYKQGQEGFSVKLYCLDPSLLLAESFKRGRAAILFSATLSPIEYFMKILGGEE
SSYKLKLGSPFPQQNLCLMIHEGISTRYSQRDMSYDQLAEAIAIVVKSKIGNYLIFFPSY
VYLQHVYERFELNNPEIHTIVQTSGMTEEEREVFLDQFQEDPERTFVGFSLLGGIFGEGI
DLTGSRLSGAVIVGVGLPQICLERDLIRDYFQTRLKRGFEYAYMYPGLNKVLQAVGRVIR
TEQDRGVVLLVDDRFARSSYQKLFPPEWQPLRYISNLQTIEEQSRVFWNES
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatcagtacgcgaactggtcgaattcgtacttcgatcaggggatttacaatcg
acagcgaatggtccgtcccgaacactagaaggaattaaagcgcatcagtttattcagaag
gcttatggccaagaataccaacccgaagtcagcttaagttatgtttatgaacaggatgat
aggaaacttgaaattcatggtcgtgccgatggaatcattcaaaaagaatcaggtatttgc
attgacgagatcaagtctacgactcgaaactttgagcaatgggaggaatccttcagcgat
atccactgggcacaggtgaaatgctatgcctatatctatgcttttcaggttgggttaaag
tcgattgaggttcaactgacttattatcagctcaattctggtgagagccaaatttttact
cgttcatattcgatcgaggatctcgaggacttttttataaaagtagttgatagttatctt
caatgggcgaagaaaatagaatcctggaccgaagctcgggatttgagtatacgcagttta
gagttcccgtatccttcctaccgttcaggacaacgcaaactcgtcattgcagtttataaa
acgattgagcaggggaaaaaattgtttgctcaagcaccaactggaattgggaaaacgata
gcgactttattccctgcgctaaaatccctagccgaagggttaacgagcgagcttttttat
ttgacagctaaaacgatgacccgaacagtagcagaaaaagccctcagtgatctgcaagaa
caaggattgaggattaaaaggctcacattaactgcaaaagataagatctgttttttaccg
gatagcacgtgtgatccggaggaatgtccttatgctcggggctattatgatcgggtgcgg
ttggctgtggaagagatttttaatgaggattcctggaatcgggcaatgatcgaaaattat
agtcgcaatcattcagtgtgcccttttgagttctctttggatttgactaattgggctgat
gtcgtcatatgtgattataattatgtttttgatcctcgtgtctacttgcgcaggcttttt
ctcgaaggaggagattatctcttcttggttgatgaagcccataaccttgtagagcgcgca
cgtgaaatgttttctgctgaaattgtgaaggagcccttcttaaagttaaaaagggaagtt
caaactgaatttcctttgttgggtaagaaattgcagaaagtgaatgctcaattgggaaag
ctaaagaaggaacgggccgaggattttcaaaaggatccccccactgggctttattcgagt
ttgcaacaatttattaaagtggcagaaagttttttgcgggaagagaagtctgtaccttgg
aaagatgaatttttagacctttattttaaaaccttaggattcttaagaacggctgaatat
tacgatgagcgttataacacactctataaacaaggacaggaaggcttctcggtcaaacta
tattgtcttgatccctcgcttcttctggctgaatccttcaaaagaggacgtgccgctatc
cttttttcggcaactttaagtccaattgagtattttatgaaaatattagggggagaagag
tcttcttataaactgaaactgggttcgccctttcctcagcaaaacctctgtttaatgatt
catgaggggatatccacccgctatagtcaacgggatatgagttatgaccaacttgcagaa
gctatagccatagttgtgaagtcaaagataggtaactatttaatattttttccgtcatat
gtctatctgcagcatgtctatgagcggtttgagttgaataatccggaaattcataccata
gttcaaacgtctggaatgactgaagaagagagggaagtctttctcgatcaatttcaagaa
gatccagaacggacattcgtgggtttttctctcttaggtggaatttttggagaaggtatc
gatcttacgggaagccggctttccggagcggtaattgtgggtgtaggtttgcctcaaatt
tgcttggaacgagatttgattcgtgactattttcaaacgaggttgaagcgtggctttgaa
tatgcctatatgtatcccggtctaaacaaggttctgcaggcggttggacgcgtgatacgc
actgagcaagacaggggagtagtcctgcttgtggatgatcgctttgcacgatcaagttat
cagaaattatttccacctgagtggcaacccttgcggtatatctctaatcttcaaactatc
gaagagcagagtcgtgtcttttggaacgagagttga
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