Desulfitobacterium metallireducens: DESME_07120
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Entry
DESME_07120 CDS
T03599
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dmt
Desulfitobacterium metallireducens
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmt03400
]
DESME_07120
Enzymes [BR:
dmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESME_07120
DNA repair and recombination proteins [BR:
dmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DESME_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
SAB
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHF06860
UniProt:
W0E7M5
LinkDB
All DBs
Position
1413001..1417143
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AA seq
1380 aa
AA seq
DB search
MSEPKWTVEQQAAIELKGQLLVAAAAGSGKTAVLVERLIRRIIDPKAGVDVDQFLVLTFT
KAAANEMHERIGKALEDALFKETDSAEVEHLLHQRALLNRASITTIHSFCMELLRQNFYR
LELDPAFRVADQAEADLLRQDIVEDLFEALYDEESAPFQALVEAFGSDRDDQPLMEIVLK
LYEFSTSQVDPHNWLENLAFAYNWRSTDELIQSPWGESVRQGVKDKVEESIALLERAYQI
SIQPGGPKHYASCLLEDLDRLQHLSKTLKEGIWGEIEVQFQESSKFPKLPAGSRKKKETG
IDAEELSLSEEFQTALREEAKKARDNVKKKLDKLSKDLFQFPLEEQLPRLQKMGELIETL
ATVVQEFAQQYGRAKRQRNIVDFSDLEHFALRLLEEQGEDEEDETSTSVARALQKRFAEV
MVDEYQDINPVQERILQLVSRQEGPSPNLFMVGDVKQSIYRFRMADPSLFLEKYMELPHW
TSELTPSQEQKLVIDLNRNFRSRQEVIDGVNYLFRQIMTSGAGEIPYDDQAALCYGANFI
SGHAEIKTAEGPIEVHLFDPKTLKQTTKETLSANLDQDQIQEQTQDISQGESEMDEGNEE
KEYSQEDMTLEDLESARLEARLVANRIQQIIQGREFQIYDKNLQDFRATQYSDIVILMRS
FSAIAPLYVEEFQALGIPVYAETSSGYFGASEVETMLSLLKIIDNPRLDIPLAAVLRSPF
VGMNGTELGKMRSVLPQGDFYESFVLVYSAALELERMKQEQHDAEQQEQENPFISEIPDV
LEEYAKSWPQLLTQAYQVLNESPNLKNKVLYFYRKLQVYRQMARQMSLADLLWEIYEDTG
YLAYVGTLPSGPQRQANLRALYDRACRFEATNYRGLFRFLRFLDRFQGQGKDLGSARALG
ENEDVVRLITVHASKGLEFPVVFFVGLGKKFNTRSLSGNLLLHSTLGVGIPLIDFENRVR
YPSFIQTGIKERLWQESLAEELRILYVALTRAKERLFLYGSLSKIPEIIKQWQSLASCIT
PAFPDGQLRSARSFMDWIGPALARHPQNFFDESVKPELLDSSSQWLVQVHEHLVIPSAEK
REGQEQEQGEYSSENETEFVAERSLEEWFQLVDERLNYHYAYPEAVHQAAKTSVSELKRR
FAWHKDDLADTPVEKRLSQEYTRPKFLQISKKLTPAERGTAFHAVMEHLPLQDWSKNWSA
FSGEEQEIHIGILFQSLLKREILTLEQVETLSIKQIANYINSPLGMRLLTAKEVRREVPF
TLTLFLDTPTECPEEADRGCEGILVQGVIDALVLSSDRKSAEIVDYKTDQIKFMETPEKT
LVERYALQLSIYSLAVERLLQIRVDQATLYSVDLSCEIPIPEKEIRAQQEKLKKTPIDLS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccgaaatggacggttgagcaacaggctgctattgagctcaaaggacaactc
ttggttgctgcagccgctggttctggaaaaacagccgttttggtggaacgtttgattcgg
cgcatcatcgaccctaaagcaggagtggatgtggatcagtttctcgtgcttacctttact
aaagcggccgcgaatgaaatgcatgaaagaatcggtaaagccttagaggatgctttattc
aaggagaccgattcagctgaggttgaacacctcctgcatcagcgcgcgcttctcaaccgc
gctagtatcacaacgattcattctttttgtatggagcttcttcgtcagaatttttatcgt
cttgagctcgaccctgccttcagagtcgctgatcaagctgaggccgatctcttacgtcaa
gatatcgttgaagatctttttgaagcgctatatgacgaggagagtgcacctttccaagct
ttggttgaagctttcgggtctgatcgcgatgaccaacctttaatggaaatcgttttaaaa
ctctatgaattttccacgagtcaagttgatcctcataactggttagaaaacctggctttt
gcctataattggagaagtacggacgagctaattcaaagtccctggggagagtctgtccgg
caaggtgttaaagacaaagttgaagaaagcattgcattattggaacgtgcgtatcagatc
agcatacaacctggaggaccgaagcactacgcgagttgcctactggaagatcttgatcgc
ttacaacatctcagcaaaacattaaaagaaggaatttggggtgaaatcgaagttcaattc
caagaatcctcaaaatttccaaagcttccagcaggttctcgtaagaaaaaagaaacgggc
attgacgccgaagaactttcactttctgaagagtttcagaccgctctacgggaagaagca
aaaaaagcgcgagataatgtgaaaaagaaactcgataagctcagcaaagatttatttcag
tttccactggaggaacaacttcctcgactgcagaagatgggggagctcatcgagacatta
gccactgttgttcaagaatttgcgcagcaatatggtcgtgcaaaacgtcaacgaaatatt
gtcgatttttctgatcttgaacattttgctttaaggttgttggaagaacagggagaagat
gaagaagatgagacttcgacttcagttgcacgggctttacaaaaacgttttgctgaggtt
atggttgacgaataccaggatataaatcctgtccaagaaagaattctgcagctcgtctct
cggcaggaaggaccgtctcccaatctattcatggtgggtgatgtcaaacagagtatttat
cgttttcgcatggccgatcctagcttatttttggaaaaatatatggaattaccccattgg
acgtcagaactaaccccttctcaagagcaaaagttagtgattgatctgaatcggaatttt
cgaagccgccaggaagtgattgacggagtcaattacctatttcgtcagattatgacgtca
ggagcaggtgaaattccatatgatgatcaagctgctttatgctatggcgcgaatttcatc
agtggacatgctgagattaaaactgcagagggtccgattgaggttcacctatttgatcct
aaaactttaaaacagacgacgaaggagactctctctgcaaatttagaccaggatcaaatc
caagagcaaacccaagacataagtcaaggggagagtgaaatggatgagggtaatgaagag
aaggaatattcgcaagaagatatgactctcgaagatcttgaatcagcgcgtttggaagcg
cgtttagttgccaaccggattcaacagattattcaggggcgtgaatttcaaatctatgat
aaaaatcttcaagattttcgcgccacccaatattctgacattgtcattttgatgcgttcc
ttctcagcgattgctccactttatgtagaagaatttcaggctttgggaattccggtttat
gctgaaacgagcagtggttacttcggagcgagcgaagtcgaaacgatgctttctcttctt
aaaattatagataatccccgtttagatattcctttggctgcggttcttcgctctcctttt
gtaggtatgaatggaacagaattgggaaaaatgcgttccgtattgcctcaaggtgatttt
tatgaatcttttgtcctggtttattcggcagccctagaactggaacgaatgaagcaggaa
caacacgatgcagaacagcaagaacaggaaaatccctttatctcagagattccagacgtg
cttgaagaatatgcaaaatcttggcctcaacttttaacgcaagcttatcaggttcttaat
gaatcaccgaaccttaagaataaagtgctctacttttatcgcaaactccaagtttatcgt
cagatggccagacagatgtccttagccgacttattatgggaaatttatgaggatacagga
tatttggcgtatgtcggaaccttacccagcggtccccaacgtcaggcgaatctgcgtgcg
ctctatgatcgtgcatgccgttttgaagcaactaattaccgaggcctttttcgttttctc
cgtttccttgaccgttttcaaggacagggtaaagatttaggaagcgcacgagctttgggg
gaaaatgaagatgtagtacgcttgattaccgttcacgcgagcaagggattggaatttccc
gttgttttcttcgtagggctagggaagaaattcaatacccgcagtctaagcggcaatctc
ttacttcattcaactcttggggtcggaattccgttgatagattttgagaatcgtgttcgt
tatccatcttttattcaaacgggtataaaggaacgactttggcaggagtctttggctgag
gagctccgcattctttatgttgcattaacccgagctaaagaaaggttatttctttatggc
agtctttccaaaatacctgagataattaaacaatggcaaagtttagcatcctgcattact
cctgcgttcccagatggtcaactacgcagtgctcgctctttcatggattggataggtccc
gcactggcacgtcatccacagaatttttttgatgaatcggttaagcctgaactcctcgat
agttcctctcagtggttagtccaagttcatgaacatcttgtgatcccttcagctgagaag
agggaagggcaagagcaagagcaaggggaatattcctcagaaaacgaaactgaattcgtg
gcggagcgttctttagaggaatggtttcaattggttgatgaacgattgaattatcattat
gcttatccagaagctgttcatcaggcagctaagaccagtgttagcgagttaaaacgccgt
tttgcttggcataaagatgatttggcagatacacctgtagaaaaaagactttcccaagag
tacacacgacctaaattccttcaaatcagcaagaaattaaccccagcagaacgtggaact
gcttttcatgcggtcatggagcatttgcccttacaggattggtcaaaaaattggtctgct
ttttcgggtgaagagcaagaaattcatattggaattctttttcaatctctgcttaaacga
gaaattcttaccctggagcaagtagagaccctttctataaagcagatcgcaaattacatc
aattcgccattaggcatgcgccttcttacggccaaggaagttcgccgagaagttccgttt
accttaacactttttctggatactcccacagaatgtcctgaagaggcagacagaggatgc
gagggaatcctcgttcaaggggtaattgacgcacttgttctttcttctgatcggaaaagt
gcagagatcgtagattataaaacggatcagattaaattcatggagactcctgaaaaaaca
ctggtagaacgctatgcattgcaactttctatatattctttagccgttgaacgactcctt
cagatccgagtcgaccaagcaaccctttactcggtcgatcttagttgtgagatacccata
cccgaaaaagagatccgggcacaacaagaaaagctaaaaaaaacccccatagatttatcg
taa
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