Desulfitobacterium metallireducens: DESME_07870
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Entry
DESME_07870 CDS
T03599
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dmt
Desulfitobacterium metallireducens
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmt03016
]
DESME_07870
Enzymes [BR:
dmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DESME_07870
Transfer RNA biogenesis [BR:
dmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DESME_07870
Prokaryotic type
DESME_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AHF06993
UniProt:
W0EBS5
LinkDB
All DBs
Position
complement(1562644..1563381)
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AA seq
245 aa
AA seq
DB search
MRNLKLTIAYDGSRYKGWQKQKDNDLTIQGKIETVLSKMTGESILLVGCGRTDSGVHAEN
YIANFHTKCALSPNEIVDYLYEYLPEDIVVKSIDEIAERFHARYNVKSKTYVYRINTDKF
RDVFNRKYTYHLADKLNLREMKSASEVLIGTHDFQSFTNLKSRDKSTIRTINYINIGEQD
GLLEIEVNGNGFLWNMVRIIVGTLLEVGKGNLKPSDVEKILNEKKRWEAGPLAQAKGLFL
KDVQY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttaaaattgaccattgcctatgatggatctagatacaaaggctggcaaaaa
caaaaggacaatgatctcacaatacaaggtaaaatagaaaccgtcttatccaaaatgact
ggagaatctattcttctcgtgggatgtggtcgaaccgattcaggagtccatgctgaaaat
tacatcgccaatttccatactaaatgcgccttgagtcccaacgaaatagtagattatctt
tatgagtatttaccagaagatatcgttgtaaaatctatcgatgagatagctgaaaggttt
catgccagatataatgtaaaatcaaaaacgtatgtatatagaataaatacggacaaattc
agagatgtgtttaacagaaagtatacttatcaccttgctgataaacttaatttaagagaa
atgaaaagtgcttcagaggttttaattggcacgcatgattttcagagttttactaactta
aaaagcagagacaaatcaacgatcagaacgatcaattatatcaatataggtgaacaggat
ggacttctagaaatagaggtgaatggcaatggcttcttgtggaatatggtaagaatcatt
gttggaacacttcttgaagtcggtaaaggtaatcttaaaccaagtgatgttgaaaaaata
ttaaatgaaaagaaaagatgggaagctgggcctttagctcaagctaaagggctatttcta
aaagatgtccaatattaa
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