Desulfitobacterium metallireducens: DESME_08425
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Entry
DESME_08425 CDS
T03599
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
dmt
Desulfitobacterium metallireducens
Pathway
dmt03030
DNA replication
dmt03430
Mismatch repair
dmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DESME_08425 (polC)
03430 Mismatch repair
DESME_08425 (polC)
03440 Homologous recombination
DESME_08425 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmt03032
]
DESME_08425 (polC)
03400 DNA repair and recombination proteins [BR:
dmt03400
]
DESME_08425 (polC)
Enzymes [BR:
dmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DESME_08425 (polC)
DNA replication proteins [BR:
dmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DESME_08425 (polC)
DNA repair and recombination proteins [BR:
dmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DESME_08425 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AHF07095
UniProt:
W0E8A2
LinkDB
All DBs
Position
complement(1687751..1692100)
Genome browser
AA seq
1449 aa
AA seq
DB search
MKRINEIFSDYDAGDNINTAIVKAVIVSEKSKTLEMKISSDKYIQIKEIKALNTFIRERL
ALNDSKIIVEYSEGTNKKPLEEELKNIVLLLADKYPILRAAINNCKYEIAEDNTITFNFN
IAVSYLLKARGYDEIIREAIKNLYGIVCQINFVDKVSNEELKRLKEAAYEKEMLLIQKEV
QTTLQSNTPPELPRDAIEKKQEIKAESDEKKGNPLLILGRNANIKEHIIKITDITPDEGK
IALAGEISNIEVKELRSGKTLISFDLYDGSSSMTCKAFIKPGEDGEVLTRLQSAKGVRLS
GNAGYSQFSGEIELIANTILETEGMKKAAKRLDRAEVKRVELHMHTQMSQMDAMTSATDL
IKRAMSWGMKSIAITDHGVVQSFPEAHKLLGRDNPNMKVIYGVEAYLAPDKKSSVTNAKG
QSIDTTYCVLDLETTGFSAVTEKITEIGIMKFQRGKVIDEFSCFVNPEKSIPARVVEVTN
ITDEMVKNAETIDKVFPKMLDFIEGSVLVAHNAEFDIGFLKHNAKVLGYDFDYTYLDTLS
LAKEIFPDFKTYKLGRIAKNLGIKVEVAHRALDDVDTTVKVFKAMLEKLKQRGAETLEDI
DLKASDEGAKREEYKKLKTYHAIILAKDYVGLKNLYKLVSYSHLDYFYKKPRILKSLYKK
YSEGLILGSACSEGELYQAILLGKSDEEIEALAEEYDYLEIQPLLNNDYLVRTEQVPNKE
YLQRINQEIVRLGEKLNKPVVATGDVHFMDPEDEIYRRILEAGQGFKDADSQAPLYLKTT
DEMLEEFSYLGEEKAYEVVVTNTNMISDMCESISPISQEKCPPHIEGCEQTIKDIAYSKA
HDLYGEPLPEILQQRLDKELDSIIKNGFSVMYIIAQKLVWKSNEDGYLVGSRGSVGSSVV
AYMTGITEVNALPPHYRCPSCKYSDFSDYGCKNGFDLPDKVCPICGEKLAKDGIDIPFET
FLGFNGDKEPDIDLNFSGEYQAKAHKYTEVIFGKGTTFKAGTIGTIAEKTAFGYVKKYFE
EKNRTANKAEIARISKGCTGIKRTTGQHPGGIIVVPKGREIFEFCPVQHPADDSNSDIIT
THFDYHSIDQNLLKLDILGHDDPTVIRMLQDITGVDPKKIPMDDKETMSLFSSTEALGVT
PEQINSKVGTFGVPEFGTKFVRGMLLDTMPKTFADLICISGLSHGTDVWLGNAKDLIDAG
TVTLSEAVCTRDDIMVYLIKRGLPPNTAFKIMETVRKGKALKEPKWAEYEAIMREHEVPE
WYIDSCKKIKYMFPKAHAAAYIMMAFRIAWFKVHIPMAYYVAYFTIRAKAFDAEFMIFGK
EKVKAKMKEIEMLGNQAAPKDKDIYDDLELVFEMYERGFKFLPIDLYKSHATKFLVEEDG
LRPPINSISGMGTVAAEGIFNAAQEKPFNSIEDVKRRAKIGNSAIDLLRKFGCLNGIQES
DQMSLFDII
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaataaatgaaatttttagtgattatgatgctggggataatatcaatactgca
attgtaaaagcggtgattgtgagtgaaaagagtaaaaccctggagatgaaaatcagctct
gataaatatattcaaatcaaagaaattaaagctcttaatacgttcattagagaaagatta
gccttaaacgattctaaaatcattgtggagtattctgagggaacgaataaaaaaccccta
gaagaggaacttaaaaatattgttcttttgttggcagataaatatcccatcttaagagca
gccataaataattgtaaatatgaaatcgctgaagataacacgataacttttaattttaat
attgcggtatcctacttattaaaagctaggggttatgatgaaataatccgagaggctatt
aaaaacttgtacggaatagtatgtcaaatcaattttgttgataaagtaagcaacgaagaa
ttaaaaagactgaaagaggctgcatatgaaaaggaaatgctgctgattcaaaaggaagtt
cagaccacacttcaaagtaatactcctcctgaattgcccagggacgctatagaaaaaaag
caggaaataaaggctgaaagcgatgaaaaaaaaggtaatccattattgatattaggcaga
aacgcgaatattaaggagcatatcattaaaattacggacattacaccagatgagggtaag
attgctttagcgggcgaaatatctaatatcgaagtcaaagaattaagaagcggaaagact
ttaatttcttttgatttatatgatggctcaagttctatgacctgtaaggccttcatcaaa
ccgggtgaagatggtgaagtgttaaccaggcttcaatcggctaagggtgtcaggctttca
gggaatgcaggctatagccaattttcaggggaaattgagcttatcgccaatacaatatta
gaaacagaaggcatgaaaaaggctgccaagagactggatagggcagaggttaagcgggta
gaactgcatatgcatacgcaaatgagtcagatggatgcgatgactagtgccactgattta
attaaaagagcgatgagctggggtatgaaatcgattgccataacggatcatggagttgtt
cagtcctttccagaggcccataagcttttaggaagagataaccccaacatgaaggttatc
tatggagtcgaggcctatttagcaccggataaaaagtcatcagtaacaaacgccaaggga
cagagtatcgatactacctattgtgtgttggatttagaaaccacaggtttttcagctgtt
acagaaaaaattaccgaaataggaattatgaaatttcaaaggggtaaggtaattgatgaa
tttagctgctttgtaaatcctgaaaagtctattccagcaagggttgtggaagttactaat
ataactgatgagatggtgaaaaatgccgaaaccatagacaaggtctttcctaaaatgttg
gattttattgagggtagcgttttagtggctcataatgctgaatttgatataggtttccta
aagcataatgccaaggttttaggctacgattttgattacacctatttggacaccttgtcc
ttagcaaaggagatctttcctgattttaaaacgtataaattaggaagaattgctaaaaat
cttggtatcaaggtggaagttgcccatcgagccttagatgatgtggacaccacggttaag
gtgttcaaagcaatgcttgaaaagctaaagcaaaggggagcagaaacccttgaggatatc
gaccttaaggcttcagacgaaggagcgaagagggaagaatataaaaagcttaaaacctat
catgcgataatattagcaaaggattatgtcgggctaaagaatttatataagctggtatcc
tattcccatctcgattatttttataaaaaaccccggattttaaagagcctttataagaaa
tactctgaaggtttaatccttggcagtgcctgcagcgaaggtgagctttatcaggccatc
ttgcttggaaaatccgatgaagaaattgaggcccttgctgaggagtacgattatttagaa
atccagcctctcttgaataatgattatttagtaagaacagaacaggtcccaaacaaagaa
tatttgcagcgaatcaatcaagaaattgttcgtttgggtgaaaaattaaacaagcccgtc
gttgctacgggagatgttcacttcatggatcctgaagacgagatctatagacgcattctg
gaagcaggtcagggcttcaaggatgcagatagtcaggcacccttatatttaaaaacgacc
gacgaaatgcttgaggaattttcctatttaggagaggaaaaggcctatgaggtggttgta
accaacaccaatatgatctccgatatgtgtgagtcgatcagtcctatttcccaggagaaa
tgcccacctcatattgaaggttgtgagcagaccattaaggatattgcatatagtaaggcc
catgatctatatggagaacccttgccggaaattcttcaacaaaggctcgataaggaactg
gattcgatcatcaaaaacggtttctccgtaatgtatatcatcgctcaaaagctcgtatgg
aaatcaaacgaggacggttatcttgtaggttctcgaggctctgttggttcctcagttgtc
gcctatatgacgggtataacggaagtgaatgctctgccacctcattacaggtgcccaagc
tgcaagtactcggacttttccgattatggctgcaaaaacggctttgacttgccggataag
gtttgtcctatttgcggagaaaagctggctaaagacggcattgatatccccttcgaaacc
ttcttaggtttcaatggagataaggagcccgatatcgacttgaatttttcaggagaatat
caggcaaaagcccataaatatacagaggttatctttggtaagggtacaacctttaaggcc
ggaactatcggtaccatagccgaaaaaacagcttttggctatgtaaaaaagtattttgag
gagaagaatcggacagcaaacaaagcggaaatcgccagaatctcaaaaggctgcacaggt
ataaaaagaactacgggacagcatccgggtggaatcatcgtcgtgcctaagggaagggag
atttttgaattttgccctgtacagcatcctgcggatgattccaattcggatatcatcaca
acccattttgactaccattcgattgaccagaacctattaaagctggatatattgggtcat
gatgaccctacagtaataagaatgcttcaggatatcacaggagtagatcccaaaaagatc
cctatggatgataaggaaacgatgtccttattttcatccacggaagccttaggggttacc
ccagagcagatcaattctaaggttggaacttttggagtccctgagtttgggacgaagttc
gtaagaggaatgcttttagatacaatgcccaaaaccttcgcagatttgatctgtatatca
ggactttcccacggtactgatgtgtggttggggaatgctaaagacttaattgatgcggga
acagtgaccttaagtgaagccgtatgtacccgggatgatattatggtttatcttattaaa
aggggtctgccgccaaatactgcctttaagatcatggagacggtgcgtaaggggaaagca
ttaaaggaaccaaaatgggctgaatatgaagcgataatgagggagcatgaagtaccggaa
tggtatattgattcctgcaaaaaaataaaatatatgtttcctaaggcccatgctgcagcc
tatataatgatggctttcagaatagcttggtttaaggtgcatataccaatggcttattat
gtagcctacttcaccattcgggcaaaggcatttgacgccgaatttatgatattcggcaaa
gaaaaggttaaggcaaaaatgaaggaaattgagatgttgggcaatcaagctgcccctaag
gataaggatatatatgatgacttggaattggtttttgaaatgtatgaaaggggctttaaa
ttcttgcccattgatttatacaaatctcatgccacaaaattcctggttgaggaggatggt
ttaaggccgccgataaacagcatatccggtatgggaaccgtcgctgcggaaggtatattt
aacgcggcccaagaaaagcccttcaactccattgaggatgtaaagagacgtgctaagatt
gggaattctgccatagatttacttagaaaatttggctgtttaaacggtattcaagaaagt
gatcaaatgagtctctttgatataatctag
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