Desulfitobacterium metallireducens: DESME_09795
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Entry
DESME_09795 CDS
T03599
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
dmt
Desulfitobacterium metallireducens
Pathway
dmt00900
Terpenoid backbone biosynthesis
dmt01100
Metabolic pathways
dmt01110
Biosynthesis of secondary metabolites
dmt03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DESME_09795
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
DESME_09795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dmt03011
]
DESME_09795
Enzymes [BR:
dmt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
DESME_09795
Ribosome [BR:
dmt03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
DESME_09795
Bacteria
DESME_09795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
YmdB
MRP-S35
FadA
BRCC36_C
Motif
Other DBs
NCBI-ProteinID:
AHF07283
UniProt:
W0ECP5
LinkDB
All DBs
Position
complement(1951110..1953122)
Genome browser
AA seq
670 aa
AA seq
DB search
MKVIQAEKAGFCFGVKRALERAERTVQNSATVSFGPLIHNQQVVDRLEKQGVRVIDAVEE
AKSSETMIIRSHGVPPEIYQAALERGIEVEDATCPFVQKAQKLAAEASQRSQVIVVGDKH
HPEVQGILGWAGGDAFAIETLQEAQELPFYPHLSVLAQTTQPHANFQRIVDELHQHTQEL
TVYNTICNATEERQTVAWELAGKVDVMVVVGGRNSANTRKLASICSEQTETHLIETADEL
NENWFKGIHKAGLTAGASTPDWIIEEVKKKMTEIDEKDLTVQNEEEMDLNDIDMENWADH
MTKLHRGAVVTGTVVKLTHDEVYVDLGWKSEGIISLQELSVAPVSNPSEVVSVGDEIRVV
VLKVENQEGNPVLSKRRAAEEEASERLEQLAESKEELQAKVTEVVKGGLLVDVGMRGFVP
ASQIQLGYVEDLKQFLGQTLRLRVIEFDPAKHKVVLSQKVILAEEQVSKRAELFETLQEG
DTVTGVVRRLADFGAFVDIGGVDGLLHVSEMAYSRVKHPSEIVNVGDEVEVQVLKLDKEH
SKVSLGLKQLKPSPWDAVAQKYALGSLVTGKVVRLAPFGAFVQLEDGVDALVHISQLSEK
RVAKVEDVVKVGDMVQAKVIECKPEEKRISLSIREAISEAQATQDEEVLAAQSDIPAVTI
GDVLKQDLEQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggttattcaggcagaaaaagccggtttttgctttggtgtcaaacgtgcactggaa
agggcagaacgtacggttcaaaattcggcgacagtatcgtttggtcctttaatccataat
caacaggtcgtggatcgcttggaaaagcaaggggtgcgtgttattgatgctgtcgaagaa
gcaaagtcgagcgaaaccatgattatccgttcacatggagttccaccggaaatttatcag
gcagctctagaacgaggaatcgaagttgaagatgcgacttgcccctttgttcagaaggcg
cagaagctcgcagcagaagcttctcaaaggagtcaagttattgttgtaggggacaagcat
catccagaagtccaaggcatcttaggctgggcaggtggagatgctttcgcgatagaaacg
ttgcaagaagctcaagaactccccttttatccgcacttatccgttctcgctcagacgaca
caaccacatgccaattttcagaggattgttgacgagttgcatcagcatactcaagaatta
accgtttacaatacgatttgcaatgccacggaagaacgacaaacggtggcttgggaactg
gcgggaaaagtcgacgtgatggtcgttgttggcggcagaaatagtgcgaatacacgaaag
ctcgcttccatatgctcagagcaaactgaaacccatcttattgaaaccgcagatgaatta
aatgaaaactggtttaagggtatacataaagcgggcttaaccgcaggtgcctcgacgcca
gattggataattgaggaggtaaagaagaaaatgacagaaattgatgaaaaggatttaact
gtccaaaacgaggaagaaatggatcttaacgacatagatatggagaactgggctgatcat
atgacaaagttacatcgtggcgcagttgtaacggggacggttgtgaagcttactcatgac
gaagtttatgttgatcttggctggaagtcggaaggtattatttccttacaagaactttcg
gttgcacctgtttcaaacccaagcgaagtggtttcagttggagatgagattagagtcgtc
gtgttaaaagtggagaatcaagagggaaatccggtgctctccaaacgacgtgctgctgaa
gaagaggcaagcgaacgacttgaacaattagctgagtctaaagaagaacttcaagctaag
gttactgaagtggtcaaaggcggtttacttgtggatgttgggatgcgtggttttgtacct
gcttcgcaaattcaattaggatatgttgaggacctaaaacagtttttgggacaaaccttg
cgcttacgggtcatcgaatttgatcccgctaaacataaagtcgttctttctcagaaggtt
attcttgctgaagaacaagtgagtaaacgggctgaacttttcgaaacattgcaagagggt
gacacagtcacaggtgtcgtgcgtcgcttggctgattttggggcatttgttgatatcggg
ggtgtcgatggacttctccatgtatcggaaatggcttattcccgagtcaaacatccttct
gaaattgttaatgtcggagacgaagttgaagttcaagtattaaagttagataaagagcat
tcgaaagtttctttgggattaaagcaactgaaacctagtccttgggatgctgttgctcaa
aagtatgcactcggttctcttgtaaccggtaaggtcgttcgtctcgctccttttggcgca
tttgtccaattggaagatggagtcgatgcgttggttcatatttcacagctttcagaaaaa
agagtggcgaaggttgaggatgtagtaaaggtcggagatatggttcaggccaaggtgatt
gagtgcaagccggaagaaaaacggatcagtctaagtatccgggaagcgatctctgaggcg
caagctactcaggatgaagaagttttagcagctcaatcggatattcctgcagttacaatc
ggggatgtcctgaaacaggatttagaacaataa
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