Desulfitobacterium metallireducens: DESME_11230
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Entry
DESME_11230 CDS
T03599
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
dmt
Desulfitobacterium metallireducens
Pathway
dmt00550
Peptidoglycan biosynthesis
dmt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DESME_11230
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmt01002
]
DESME_11230
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dmt01011
]
DESME_11230
Enzymes [BR:
dmt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DESME_11230
Peptidases and inhibitors [BR:
dmt01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
DESME_11230
Peptidoglycan biosynthesis and degradation proteins [BR:
dmt01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DESME_11230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Transpeptidase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AHF07509
UniProt:
W0EE72
LinkDB
All DBs
Position
complement(2194259..2195365)
Genome browser
AA seq
368 aa
AA seq
DB search
MFRPKWMFTCVCAVLIAVLGVQPVQAINQSRPAVTADAAVLMDVITGDVLFDKQAHKRRA
PASTTKMMTAILGLELGRPDEVVTVSPKAAAVGESTIHLDPGERATLYELITGALVKSGN
DACVAIGEQIAGSEAQFVRMMNQKALFIGAKDTHFENTNGLPHKNHYSTAYDLALIARYG
MQLPAFSSITRQKETEIHFLEPDFMMDLRNTNKLLWNYPFADGVKTGTTNAAGKCLVASA
TKNGRQLVAVVLHAPDRFGDAQKLLEWGFAQTESVSVVKAGEMVAEFPLESPEPLKGLAK
YSVVVSLAKIDKDKIEKRVQWTRSTHLPIQAGEELGVFEVWLNGQKITSVPLVAEREFKV
LKPFFRRF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggccaaagtggatgtttacctgtgtctgcgctgtgctgatcgctgtattggga
gttcagccagtacaagcgataaatcaatctcgtcccgctgtaacagcggatgcagcagtg
cttatggatgtaatcacaggggatgttctttttgataaacaagctcataagcgacgagcg
ccagcaagcacgacaaaaatgatgacagcaatcttagggcttgaactggggagaccggat
gaagttgtgacggtgagccctaaagctgcagcggtaggggaatcgaccattcatcttgac
ccgggagaaagggctacactttatgagctgattactggggctttagttaagtcaggcaat
gatgcttgtgttgcgataggagaacaaatcgcaggaagtgaagctcaatttgttcggatg
atgaatcaaaaagcgcttttcattggggccaaggatacacattttgaaaatactaacggt
ttaccccataaaaatcattattcgactgcgtatgatttggctttaattgcccgctatggg
atgcaacttcctgccttttcttcaattactcggcaaaaagaaacagaaattcatttcttg
gagcccgactttatgatggatttgcgcaacacgaataaactgctttggaactaccccttt
gcagatggagtcaaaacggggacgactaacgcagcgggaaaatgtttggtagcttctgca
acgaaaaatggacggcaattggttgcggttgtacttcatgccccggatcgcttcggagat
gcgcaaaaactgctggaatggggattcgctcaaacagagagcgtttcagtggtaaaggca
ggagaaatggtggcggaatttcccctggaaagtccagagccattaaaaggcttggctaag
tattctgtggtagtcagtcttgctaaaatagataaagataaaattgaaaagagagttcag
tggacgcgttcaacccatttacccattcaagccggtgaagaactcggagtttttgaagtc
tggctaaatggacagaaaataacaagtgttcccttggtggcggaacgcgagttcaaggta
ctcaaaccgttttttcgtagattttaa
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