Desulfurococcus mucosus: Desmu_0223
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Entry
Desmu_0223 CDS
T01406
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
dmu
Desulfurococcus mucosus
Pathway
dmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Desmu_0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmu03021
]
Desmu_0223
Transcription machinery [BR:
dmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Desmu_0223
Prokaryotic type
Archaeal type
TFB
Desmu_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
HTH_Tnp_ISL3
Sigma70_r4
Sigma70_r4_2
RB_B
Motif
Other DBs
NCBI-ProteinID:
ADV64542
UniProt:
E8R7P7
LinkDB
All DBs
Position
209818..210765
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AA seq
315 aa
AA seq
DB search
MFTDTPTQSPEAQSSGEESKKPKCPQDKIVYDAAHGEYVCQDTGEVIEEKVIDERPEWRA
FTPEERGRRARTGGPVTAAVHDMGFATSIDYTDRDAAGRRLTEKKHELVKLRKWQARTRI
LTSVERNLAQAMNELDRLADVLNLPSYVKEEAARIYREAVDRGLVRGRSIESVIAAAIYL
ACREMKVPRSLDEITRHTRIGRKEIARCYRLLLRELRIKVSTTDPADYVPRIVHGLGLPG
QAVKLAIEIINTAKEHGVTGGKDPAGLAAAAVYMAAERLGEKKTQKEIAHIAGVTEVTVR
NRYKELAKVLGVEYE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgtttacagatacacccactcagtctcctgaagcccagtcaagtggggaggagagtaag
aagcccaagtgtcctcaggacaagatagtgtatgatgctgcccacggcgaatacgtgtgc
caggacactggtgaagtaatagaggagaaggttatagatgagaggcctgaatggagggcc
ttcactcctgaggaaagaggtaggagggctaggaccggcgggcctgtcacagcggcagtc
cacgacatggggttcgcgacgtcaatagattacactgaccgcgatgcagctggcagaagg
ctcactgagaagaagcatgagttggtgaagctgaggaagtggcaggcgagaacaaggata
cttacaagtgtagagagaaatctggcgcaggccatgaacgagctggacaggcttgcagac
gtcttgaacctgccttcctatgttaaagaggaggcagctaggatttaccgcgaggcggtt
gacagggggctcgtcaggggtagaagcatagagagcgttatagcggcggccatatatcta
gcatgccgagaaatgaaggtaccccgatccctcgacgagataacgaggcatacaaggatt
gggaggaaggagatagcaaggtgctaccggttactgttaagggagctcaggataaaggtg
tcaacaacggatccagcagactacgtccccaggatagtgcacgggcttggattaccgggt
caagcagttaagttagccattgagataataaacactgctaaggagcacggtgtaacagga
ggtaaggatccagccgggctcgcggctgcagccgtatacatggcggctgagagactaggc
gagaagaagactcagaaagagatagcccatatagcaggtgtcacggaggtaaccgttagg
aacaggtataaggagctcgccaaagtgcttggcgtggaatacgagtag
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