Desulfurococcus mucosus: Desmu_0240
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Entry
Desmu_0240 CDS
T01406
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dmu
Desulfurococcus mucosus
Pathway
dmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Desmu_0240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmu03019
]
Desmu_0240
03009 Ribosome biogenesis [BR:
dmu03009
]
Desmu_0240
04131 Membrane trafficking [BR:
dmu04131
]
Desmu_0240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmu04147
]
Desmu_0240
Messenger RNA biogenesis [BR:
dmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Desmu_0240
Ribosome biogenesis [BR:
dmu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Desmu_0240
Membrane trafficking [BR:
dmu04131
]
SNARE
SNARE associated proteins
Others
Desmu_0240
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Desmu_0240
Exosome [BR:
dmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desmu_0240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_5
AAA_22
AAA_33
AAA_2
AAA_14
AAA_28
Vps4_C
RNA_helicase
AAA_lid_PRS2_C
IstB_IS21
AAA_18
nSTAND3
Mg_chelatase
AAA_25
ATPase
Parvo_NS1
AAA_24
ABC_tran
AAA_7
TsaE
ATPase_2
NPHP3_N
DUF815
AAA_3
Zeta_toxin
PhoH
AAA_17
DUF5906
bpMoxR
SLFN-g3_helicase
Bac_DnaA
AAA_6
Molydop_binding
KAP_NTPase
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
ADV64559
UniProt:
E8R7T3
LinkDB
All DBs
Position
complement(225115..227355)
Genome browser
AA seq
746 aa
AA seq
DB search
MSTQRKGEKSIKLRVAEARQRDIGRKIARIDRETMAKLGVSLGDFIEVTGPKGSEIVKVW
QAYPEDEGSGLIRIDGFVRRKIGVSPGDYVTVKPVYVEPATRVVLAPVGDLPVYGDLAPY
LKKQLLGNPVKRGDIVEAPIFGMLLRFAVTSTQPPSVVYITENTHVEVKTEPVRPEALGE
GVSRVTWEDIGDLEEAKQKIREIVELPMKYPELFEHLGIEPPKGILLYGPPGTGKTLLAK
ALANEIGAYFITINGPEIMSKFYGESEERLRKIFEEAQANAPAVIFIDEIDSIAPKREEV
TGEVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDAIDPALRRPGRFDREIEIPPPDKRA
RKEILAVHTRNMPLTEDVDLDKIADMTHGYTGADIAALAKEAAMNALRRFMKEEGIEIEK
GQPIPAEKLEKLKVTMEDFLVAMKSVQPSLIREVFVEVPNVRWDDIGGLDDVKQELREAI
EWPMKYPGVFEKMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVG
ESEKAIRQIFRRARMVAPAVVFFDEIDSIAGVRGSDPSGVTDRIVNQMLTELDGIQPLRK
VVVIAATNRPDLLDPALLRPGRFDRLIYVPPPDYNARLQIFKVHTRKMPLGEDVNLEELA
RKTEGYTGADIAAVCREASMIALRENYAATGRLDVTKIGMSHFMKALEKIPPSLSRSDIE
MYERLARELKRVSGSGSFKRLSLTYG
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccagagaaagggggagaaatcaatcaagctacgggttgctgaggcgaggcag
agagacataggtaggaagatagcgaggatagatagggagaccatggcgaagctaggggtg
tcactaggcgacttcatagaggtgacggggcccaagggcagtgagatcgtcaaggtgtgg
caggcttacccggaggatgagggcagcggattgataaggatagatggattcgttaggagg
aagataggtgtgtctccgggagactatgtaacggttaaaccagtatacgtggagccggcc
accagggttgtgctagcaccagtaggggatctaccggtttacggcgacctagcaccatac
cttaagaagcagctcctagggaacccggttaagaggggtgatatcgttgaggcacccatc
ttcggcatgctcttaaggtttgcagtcacgagtacgcagccgccctccgtggtgtacatc
acggagaacactcatgtggaagtgaagactgagcccgttagacctgaggctctaggggaa
ggcgtgtcaagggtgacatgggaggacataggcgacctcgaggaggctaagcagaaaatc
agggaaatagtggagctcccaatgaagtacccggagctattcgaacacctcggcatagag
cctccgaaaggcatactgctctatggtccgccaggcacaggtaaaaccctcctagcgaaa
gccctcgccaacgagataggtgcttacttcataactatcaatgggccggagataatgagc
aagttctacggtgaatcagaggagaggcttagaaagatctttgaggaggcccaggccaat
gcaccggcagtaatattcattgatgaaatagacagcatagcacctaaacgcgaagaggta
accggtgaagtcgagaaaagagttgtagcacaattgctgaccctgatggatggattaaag
gagagggggaaggtaatagtcataggggcaaccaacaggcctgacgccattgatccagcg
ttgaggaggcctggcagattcgacagggagatagagatacctccaccagataagagggct
aggaaggagatcctcgctgttcacacaaggaacatgcctctcaccgaggacgtcgacctc
gataaaatagccgatatgacgcacggctacactggtgccgatatagctgcactcgcgaaa
gaagccgcgatgaatgccctgcggaggttcatgaaggaggaaggcattgagatagagaag
gggcagcctatacccgccgagaaactcgagaagttaaaggtcacaatggaggacttcctg
gtagcaatgaagagcgtgcagccatcgctgataagagaagtattcgttgaagtacccaat
gtacgctgggacgacataggtggactcgacgatgtcaagcaggagctacgtgaggccatc
gagtggcctatgaagtatccaggggtcttcgagaagatgggtatagagccgccgaaaggc
atactgctattcggtccgccaggcacaggtaaaaccctcctagcgaaagctgttgcaacc
gagagcggcgccaacttcatagctataaggggacccgaggtgttgagcaagtgggttggg
gaatccgagaaagccatccgccaaatattcaggagggctaggatggttgcgccagccgtc
gtcttcttcgacgagatagatagtatagcaggcgtccgtggaagcgatccaagcggggta
accgacaggatagtgaaccagatgctgacggagctcgacggcatacagccgctgaggaag
gtcgtcgttatagcagccactaacaggccggatctacttgacccagccctcctgaggccg
ggtaggttcgaccgcctcatatatgtgccgccaccagactacaatgcgaggctgcagata
ttcaaggttcacacgaggaagatgcctctaggcgaggacgttaacctggaggagcttgct
agaaaaaccgagggatacactggcgccgacatagccgctgtctgcagggaggcatcaatg
atagctctcagggaaaattacgcggccaccggcaggctcgacgtcaccaagatcgggatg
agccacttcatgaaggcacttgagaaaatacctccatccctcagcaggagcgacatagag
atgtatgagcggcttgcaagggagctgaagagggttagcggcagtggatcctttaagagg
ctctcgctgacctatggttga
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