Desulfurococcus mucosus: Desmu_0584
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Entry
Desmu_0584 CDS
T01406
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dmu
Desulfurococcus mucosus
Brite
KEGG Orthology (KO) [BR:
dmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmu03016
]
Desmu_0584
Enzymes [BR:
dmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Desmu_0584
Transfer RNA biogenesis [BR:
dmu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Desmu_0584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Exog_C
VTT_dom
Motif
Other DBs
NCBI-ProteinID:
ADV64893
UniProt:
E8R8R7
LinkDB
All DBs
Position
complement(581580..582155)
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AA seq
191 aa
AA seq
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MSSELVRSFIAIEVKNRDVLRRLIEARDRVAGVGVDLKPVEDENIHLTLRFIGEVPRSTV
EEVCGIVTGISFKPFEMHVKGIGGFPSLERPRVIWAGIEEGAGELLELYRVVEAGLRRLG
VKPEREEFTPHITLARVKGYRGLEKLVKVLLEMRDMDFGYTPVDEVIVKKSVLTPRGPIY
SNICVKKLVQQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagtgagctggtgaggagcttcatagccatcgaggttaagaacagggatgtgttg
aggaggttgatagaggccagggacagggtcgccggggtaggcgtcgacttgaagcccgtg
gaggatgagaacatccacttaacgctcaggttcattggtgaagtaccaaggagcactgtg
gaggaggtctgcgggatagtcaccggcatctcctttaagcccttcgagatgcatgtaaag
gggatagggggttttccaagtcttgagcggccgagagttatatgggcggggattgaggaa
ggcgctggagaactcctcgaactatacagggttgtcgaggctggcctaaggaggcttggg
gtgaagcctgagagagaagagttcactccacatataacgcttgcgagagtcaagggctac
aggggcctcgagaagcttgtaaaggtgctcctggagatgagggacatggatttcggttac
acccctgttgacgaggtaatcgttaagaagagcgttctaacacctcggggtcccatatac
agtaacatatgtgtgaagaagctggtgcagcaatga
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