Dehalococcoides mccartyi CG1: X792_02945
Help
Entry
X792_02945 CDS
T03647
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dmx
Dehalococcoides mccartyi CG1
Pathway
dmx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X792_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmx03021
]
X792_02945
03400 DNA repair and recombination proteins [BR:
dmx03400
]
X792_02945
Enzymes [BR:
dmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X792_02945
Transcription machinery [BR:
dmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X792_02945
DNA repair and recombination proteins [BR:
dmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X792_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
MazG_C
Motif
Other DBs
NCBI-ProteinID:
AII57744
LinkDB
All DBs
Position
540545..544432
Genome browser
AA seq
1295 aa
AA seq
DB search
MNEVNDFDAIRISLASPDQIRSWSYGEVTKPETINYRTLKPERDGLFCERIFGPIKDFEC
ACGKYKRIRYKGIICDKCGVEIARAKVRRERMGHIELACPVGHIWFTRGIPSRVGLLLNL
STRSLERIIYYSHFIITAVNDEAREKAIKDLEVISSQRVADKGSEVDTKVAQMEAEDATV
EAINQVRRDFSAEREQMEEDIQLLIDQLKDLQIGNLLTENQYYELKQRFSNVFEASMGAE
ALLKLLSYIDMDKERSKLIQETRSTSGQRRKKAGKQLQLVEAFRRSSNKPEWMIMTVLPV
LPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLQHLMEIGAPEIIIRNEKRMLQEAVD
SLIDNGRRGKSVAVNGDHKAKSLSDLLRGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKLS
QCGLPRRMALELFKPFVMHRLVRDGLAPNIKSARRLVERARPEVYDILEEVVKERPVMLN
RAPTLHRLSIQAFEPVLIDGSALRLHPLVCSAFNADFDGDQMAVHVPLSKAAVKEARETM
LSIHNMMLPSSGEPVVSPSLDMVFGCYYLTTTRPGAKGEGKVFSDFEEAKHYYEMGIIDL
RAIIKVRDGKGNMLETTTGRIIFNDVLPKAVEFQNMDIPKSAIKKIIGRCYKILSSQDMA
IMLDKIKQLGFKYATSSGISIAMSDISVPREKAKLVAAADERTAISEGQFARGLITEDER
YNSIIETWMETTDRITDAIQAGFDKQGSVYMMANSGAKGNISQIRQMAGLRGLMTNPSGR
IIDFPIKSSLREGLTALEYFISTHGARKGLADTALRTSGSGYLTRRLIDVTQDVIILQED
CGTSNGTWIVEPKEKGMLPPLVDRVLGRWAAHNVVHPQTGEIIVENNEEIDEAKAKAIGE
AGITEVFVRSPLTCEATHGMCRRCYGRDLGRVRLVDMNTAVGIIAAQSIGEPGTQLTLRT
FHTGGVVGVDITTGLPRVEELFEARPPKVQSIISEIDGAVEVIENENGRHIRIASDEVYQ
DEYELPSGWKTQVQSGQWVDSGMVLASPEMEGKSKAVVQSDQNVVARVAGEVSVDGNLIT
IKYSESEEREYAIPAAMQIKVKTGDSVRAGQQLTDGSINPQDILSILGRDAVQKYLVEEV
QKVYYSQGVHINDKHIEVIARQMLIKVRIDSSGDTDLVPGELVDKFRYEDINAKVLAEGG
EPATAHTVLMGITRASLSTESWLAAASFQETTRVLTDAAIYGKVDKLSGLKENVIIGKLI
PAQCKSCKEATVERAERIAAAASAPAVSSLPENCL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttaatgattttgatgctatacggatttcgctggcttcccctgaccagata
cgaagctggtcttatggtgaggttaccaaacctgaaaccataaactatcgtacgttaaag
ccggagcgggacggtcttttctgtgagcgcatttttggccctattaaggactttgagtgt
gcttgcggcaaatacaaacgtatccgctacaagggcattatatgtgataagtgcggcgtg
gaaattgcccgtgccaaggtacggcgtgaacggatggggcatattgaactggcctgtccg
gtaggccatatctggttcacccgcgggattcccagccgggtaggcctgctgcttaatctt
tctacccgtagccttgaaaggattatttattattcccatttcattatcactgcggtaaat
gatgaagcccgtgaaaaagctattaaagaccttgaggttatttcatcccagcgggtggct
gataagggcagcgaggtagataccaaggttgcccagatggaagctgaagatgccactgtt
gaagctattaatcaggttcgccgtgatttttcagctgaacgtgagcaaatggaagaagat
atccagctgcttatagaccaactgaaagacctgcaaataggtaatctgttgaccgaaaac
cagtattacgaattgaaacagcgtttcagcaatgtttttgaagcatctatgggtgctgag
gccttgttaaaactgctttcttacattgatatggacaaggagcggagcaaacttattcag
gaaacccgctctacttccggccagcgccgcaaaaaggctggcaaacagcttcagctggta
gaggctttccgccgttccagcaacaagccggagtggatgattatgacggttctgccggta
ctgccgccggacctgcgtcctatggttcagcttgacggcggccgttttgccaccagtgac
ttaaatgacctttaccgcagggttattaaccgcaataaccgtctccagcacctgatggaa
atcggggctccggagattattatccgcaacgaaaaacgtatgctccaggaagcggtggat
tcactgattgataacggacgccgcggcaagagcgtagctgtaaatggtgaccacaaagcc
aagtcgctttctgatttgcttcgcggtaaacagggacgcttccgccagaatctgctgggt
aaacgtgttgactactcaggccgttcggttattgtggtaggcccttcactcaaactttca
cagtgcggtctgccccgccgtatggcacttgagctctttaaaccctttgtcatgcaccgt
ttggtacgagacgggttagcccctaatatcaagagtgcccgccgtttggtagagcgtgcc
cgccctgaggtttacgatattttggaagaggtggtcaaggagaggccggttatgcttaac
cgtgctcctactctgcatcgccttagtatccaggcctttgagccggtactcattgacggc
agtgccctcaggcttcacccgctggtttgttcagcatttaacgctgactttgatggtgac
cagatggctgtccacgtgcctctttccaaggcggccgtgaaagaagcccgtgaaaccatg
ctgtccattcataatatgatgcttccctccagcggtgagccggtggtctcccccagtctt
gatatggtctttggttgttattacctgacaaccacccgtccgggcgcaaaaggtgagggt
aaagtcttcagtgactttgaagaagccaaacattattacgaaatgggtattattgacctc
cgtgccattatcaaggtacgtgacggcaaagggaatatgctggaaaccactaccgggcgg
attatattcaatgatgtcctgcccaaggctgtagagtttcagaatatggacatacccaaa
tccgccattaaaaagataatcggacgttgttacaagatactttccagccaggatatggct
atcatgctggacaagattaaacagcttggtttcaaatacgccaccagttcaggcatttct
attgccatgagtgatatttcagtaccgcgtgaaaaagctaaactggtagccgctgctgat
gagcggactgcaatttccgaagggcagtttgcccgcggtcttatcaccgaggatgaacgt
tacaatagtattattgaaacgtggatggaaacgactgaccgcattacggacgccattcag
gctggctttgacaaacagggttctgtttacatgatggctaactctggtgctaaaggtaac
atttcccagatacgccagatggctggtctgcgcggccttatgactaacccttccggccgt
attatcgacttccccatcaagtcttccctgcgtgagggtttgactgcccttgagtacttt
atatctacccatggtgcccgcaaaggtctggctgataccgctttgcgtacgtccggttca
ggttatctgacccgccgtcttatagacgtaacacaggatgttatcattcttcaggaagac
tgcggcacttcaaatggtacctggatagtagagcccaaagaaaagggtatgctgccaccg
ctggttgaccgtgtacttggccgctgggctgctcataatgtggttcacccccaaaccggc
gaaattattgtggaaaacaatgaagagattgacgaagctaaggccaaggctatcggcgag
gctggtattaccgaggtctttgtgcgttctcctcttacctgcgaagctactcacggcatg
tgccgccgctgttacgggcgtgaccttggccgtgtccgtctggtagacatgaataccgcc
gtaggcattattgccgcccagagtatcggtgaacccggtacccagctgacactccgcacc
ttccacaccggcggtgtggtaggcgtagatattactaccggtcttcccagagttgaagaa
ctctttgaagcccgcccgcccaaggttcagtctataatctctgagatagacggtgcggta
gaagttattgaaaatgaaaatggccgccatatccgcatagcctcagatgaggtctatcag
gatgaatacgaattaccttccggctggaagactcaggttcaaagcggtcagtgggtggat
tccggtatggtactggcttcgcctgaaatggaaggcaagtccaaagctgttgttcagagc
gaccagaatgtagttgccagagtggctggtgaagtttcagtggatggcaatctgattacc
atcaagtacagcgaaagtgaagaacgcgaatacgctatacctgccgccatgcagataaag
gttaaaaccggggatagtgtccgtgccggtcagcagctgactgacggctctataaacccg
caggatattctatccattttgggcagggatgctgttcagaagtatctggttgaagaagtc
cagaaggtctactactctcagggtgtacatatcaatgataagcacatagaggttattgcc
cgccagatgcttatcaaggtacgtattgattcttccggtgatacagaccttgttccgggt
gaactggtggacaagttccgttatgaggatatcaatgccaaggttttggccgaaggcggc
gaaccggcaactgcccataccgtgcttatgggtatcacccgtgcctcactcagcaccgaa
agctggctagcggcggcctccttccaggagaccacccgcgtccttactgatgccgccatt
tacggcaaggtggacaagctgtccggccttaaggaaaatgttatcataggcaagcttata
cctgcccagtgtaagtcctgcaaggaagctacagttgaaagagcggaacgtattgccgct
gcagcttctgcacccgctgtgagcagtctgccggaaaattgcctttag
DBGET
integrated database retrieval system
