Dehalococcoides mccartyi CG1: X792_02950
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Entry
X792_02950 CDS
T03647
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dmx
Dehalococcoides mccartyi CG1
Pathway
dmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X792_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmx03400
]
X792_02950
Enzymes [BR:
dmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X792_02950
DNA repair and recombination proteins [BR:
dmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X792_02950
RecFOR pathway proteins
X792_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
DUF815
TIP49
nSTAND3
Bac_DnaA
AAA_24
AAA_16
TsaE
AAA_2
AAA_3
NB-ARC
AAA_18
AAA_14
Resolvase
IstB_IS21
RNA_helicase
AAA_25
Sigma54_activ_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
AII57745
LinkDB
All DBs
Position
544636..545685
Genome browser
AA seq
349 aa
AA seq
DB search
MSEEKERLISGKLAADDAKLDTSLRPRCLSDFIGQKRLKDNLGVAIQAAKQRGEALDHVL
LYGPPGLGKTTLSHIIALEMGVNIRITSGPAIERQGDLAAILTNLKPFDILFIDEIHRLS
RNVEEVLYPAMEDYALDIMVGKGPGARSLRLKLPHFTLIGATTRYAMLSAPLRDRFGSIF
RLDFYDEEAIYDIVRRSARILGVEADENGLHQIACRSRGTPRVANRLLRRVRDYAQVKGN
GLITGDIAAESLACLEVDKLGLDEIDHKVLKTIIHKFGGGPVGLETIAAAISEEADTIMD
VYEPYLLQLGFLERTPRGRQATRLAYQHLSIPYPADKNTQQGLWAENGT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaaaaagagcgtcttatatccgggaaactggccgccgatgatgccaagctg
gataccagccttcgcccccgttgcctgtctgattttataggtcaaaagcgcctcaaggat
aatcttggggtagccatacaggcggccaagcaaaggggagaggcgctggaccatgttttg
ctttacgggccgccgggattagggaaaaccactctttcgcatatcatagctttggagatg
ggggtgaatatccgtattacctccggtccggccattgaaaggcagggtgatttggcagct
attctgaccaatctgaagccctttgatatcctgtttatagatgaaatacaccgccttagc
cggaatgtagaggaagtcctttatccggctatggaagactacgcacttgacataatggta
ggaaaagggccgggcgccagaagcctcaggcttaaactgccacatttcaccctgataggg
gcgaccacccgctatgccatgctttcagcacctttgcgtgatcgtttcggttctatattc
cgtctggatttttatgatgaagaagccatatatgatattgtccgccgctccgcccgtata
ctaggggtggaagcagatgaaaatggtcttcatcagatagcctgccgttcccgcggcact
cctagagtggcaaaccgtttgcttcggcgggtgagggactatgcccaggtaaagggaaac
gggctgattaccggggatattgcagcggaatctctggcctgtttggaagtggataaattg
gggctggatgagattgatcacaaggttttaaaaaccattatccataaattcgggggagga
ccggtgggtcttgaaactattgccgcggctatttccgaagaagcggatacgattatggac
gtttatgaaccttatctgctccaactgggttttttggaaagaacacctagaggacgtcag
gcaacccgtttggcttaccagcacttgagtataccttatccggctgataaaaatacccag
cagggactttgggcggagaatggcacctaa
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