Dehalococcoides mccartyi CG1: X792_03315
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Entry
X792_03315 CDS
T03647
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dmx
Dehalococcoides mccartyi CG1
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmx03032
]
X792_03315
03400 DNA repair and recombination proteins [BR:
dmx03400
]
X792_03315
Enzymes [BR:
dmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
X792_03315
DNA replication proteins [BR:
dmx03032
]
Prokaryotic type
DNA Topoisomerases
X792_03315
DNA repair and recombination proteins [BR:
dmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X792_03315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_19
Toprim_4
Zn_ribbon_RPB9
DUF2207_C
Toprim_2
Zn_ribbon_3
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AII57816
LinkDB
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Position
complement(614146..616257)
Genome browser
AA seq
703 aa
AA seq
DB search
MKEKLVIVESPAKARTISKMLGKDFNIMATMGHIRDLPKSTLGVDVENSFTPKYVSLKAK
AKVIKELKDAVKNSKAIYLATDPDREGEAIAWHISEVTKANLAKPKRVVFHEITKEAIDK
AFKNTRELDMDLVNAQQARRVLDRLVGYKLSPLLWRKVQRGLSAGRVQSVSLKIIVDRER
EIEKFVSAEYWNIEALLNKKVKSAAFKASLAGYVTKGKLEIHNESEAEQIKKELEVSDYQ
VLKIKKKSNLRQSPAPFITSTLQQEAWRKLHFSAKQTMVIAQQLYEGLNIEGEGEVGLIT
YMRTDSTNVARTAVAETRDYISEKYGPAYLPKQARVFSSKVKGAQEAHEAIRPTRITRTP
DLIKKSLSAEQFKLYQLIWQRMMASQMSPATFDNTTIDIEAKHQPSKTRYLLKTTSSVNT
FPGFTIVYIEGKDEDEEAAQSSLPPMEEGEELKLKNLEASQHFTQPPPRYTEATLIKALE
QYGIGRPSTYAPTISTIQEREYITKLKGSLKPSELGMLVNNLLVEYFPDIIGIDFTAAME
TELDKIATEKLDWVPIIQRFYEPFIKEIEAASEKIEKIKPPEEELDELCPECNAKLVVKR
GRFGKFIACSRYTKEEGGCRYTRSYQIKTGAKCPECNSDIVEKYSKKGKIFYGCAGYPNC
KFVSFYKPLSKPCPECGALMTKSGKNWAKCTKCGKRKKLEDES
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaacttgttatcgttgagtcacctgccaaagcccgtactatcagcaaaatg
ctgggcaaagactttaatattatggccaccatggggcatatacgggatttacccaaaagc
accctgggcgtagatgttgaaaacagttttacccccaagtatgtctccttaaaagccaag
gccaaggtcataaaggaactcaaagacgcagttaaaaattccaaggcaatttacctggct
accgaccctgaccgcgaaggtgaggctattgcctggcatatatccgaagttaccaaagcc
aatctggctaagcctaaacgggtggtctttcacgagattaccaaagaagccatagacaag
gcttttaaaaacacccgcgaactggatatggatttggtaaatgcccagcaggcccggcgg
gtgcttgaccgactggtaggttacaaattaagcccgctgctctggcgaaaggtacaacgg
gggctttcagccggacgggtgcagtctgtttcccttaaaataattgttgaccgcgaacga
gaaatagaaaaattcgtatctgccgaatactggaatatagaagccctgctgaataaaaag
gttaaatcagccgctttcaaagcttctctggcaggttatgtaaccaaaggcaaactggag
atacataacgaatctgaagccgaacaaattaaaaaagaactggaagtatctgactatcag
gtactgaagataaaaaagaaatcaaacctcaggcaatcccccgccccctttattaccagc
acccttcagcaggaggcctggcgaaagctccatttttcagccaagcaaaccatggtgata
gcccagcagctgtatgaaggcctgaatatagagggcgaaggggaagtgggtcttattacc
tatatgcgtactgactctaccaatgtagcccgtaccgccgtagccgaaacccgtgattat
ataagtgaaaaatacggcccggcttacctgcccaaacaggccagagtattttcaagcaag
gttaagggcgcacaggaagcccatgaagctatccgccctacccgcataacccgcacccct
gacttgataaaaaagagtttgtctgccgaacagttcaaactttaccagcttatctggcag
cgtatgatggccagccagatgagcccggccacctttgataatactacaatagacatagaa
gccaagcaccagccctcaaaaacccgttatctgcttaaaaccaccagttcggtaaatact
tttccgggttttaccattgtatatatagaaggcaaggacgaagatgaggaagcggcgcag
tccagcctgccacccatggaagaaggcgaagagctgaagctgaaaaacctagaagccagc
cagcattttacccagcctcctccccgttatacagaggctacgctaatcaaggcgctggag
caatacggcataggccgccccagcacctacgcccccactatttccacaatacaggaacgg
gaatacattaccaagctcaaaggcagcctgaaacccagtgaactgggaatgctggtaaat
aacctgctggtagagtatttcccggatattatcggtatagattttacagccgccatggaa
accgaactggacaaaatagccactgaaaaactggactgggtgcctataattcagcgtttt
tatgaaccttttatcaaagagatagaagccgccagtgaaaaaattgaaaaaatcaaaccg
cccgaagaagagctggacgagctttgccccgaatgcaatgccaagctggtagtaaaacgg
gggcgttttggtaaatttattgcctgctcacgttataccaaagaagagggcggctgccgt
tatacccgctcataccagataaaaacaggtgccaaatgccctgagtgcaattcggatata
gttgaaaaatacagcaaaaagggcaagatattttacggctgtgccggttacccgaactgc
aaatttgtatctttctacaagccgctaagcaaaccctgcccggaatgcggcgcccttatg
accaagagcggcaagaactgggctaaatgcaccaagtgcggtaaacgcaaaaaacttgaa
gatgaaagctaa
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