Dehalococcoides mccartyi CG1: X792_04475
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Entry
X792_04475 CDS
T03647
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmx
Dehalococcoides mccartyi CG1
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmx03016
]
X792_04475
Enzymes [BR:
dmx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
X792_04475
Transfer RNA biogenesis [BR:
dmx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
X792_04475
Prokaryotic type
X792_04475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AII58026
LinkDB
All DBs
Position
complement(825856..826758)
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AA seq
300 aa
AA seq
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MDGILNINKPFGITSFDVVLKIRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLS
SVSKTYLAEIELGTETDSYDSEGEVTSRKPFDRITREMIQTALLDFQGEITQIPPMYSAV
KHRGMRLYNLARQGLEVERNPRTAMIYSIKLLDCNLPVLRLRIECGHGTYIRSIAFDLGR
KLGCGAYLKSLVREAYGQFNLAKSLSFTDLEAAKNEGKLQDILLPPEIAIGHLPRVTLDE
KNITRLVNGLEITLEQNDRPEVIAVYNTKNRFAAIIQPESDGSWHPAKVFVNQCLKENAD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggatggcatcttgaatatcaacaagcccttcgggataacctcctttgatgtggtttta
aaaatcagacgtatttactctcagaaacgagtagggcatggaggtacgcttgacccgtat
gccaccggagttatccccgtttttttaggcagatctacgcgtctcatagagtacctttct
tctgtcagcaagacatatctggctgaaatagagctggggacagaaacagatagttatgat
agtgaaggcgaggtcacttcccgaaaaccctttgaccggattacacgtgaaatgatacaa
acagcactgctggattttcagggtgagattactcaaatacctcctatgtatagtgccgta
aaacatcgcggaatgcggctttataatctggctcgtcagggtttagaggtagaaagaaat
ccccggacagccatgatttatagcataaaactgcttgactgcaatttgcctgtactgcgt
ttacggatagaatgtggacatggtacatatatacggtctatcgcttttgacttgggcaga
aaactgggctgcggggcatatctgaaatcactggtcagagaagcttacgggcaatttaat
ctggcaaaatctctttcatttactgaccttgaagcagccaagaatgaaggaaaactccag
gatattttgcttccacccgaaatagccatagggcatttgcctagagtgacccttgatgaa
aagaatataacacgcttggtaaatggtttggagataacactggagcaaaatgacaggcct
gaggtaattgccgtatataacacgaaaaacagatttgcggctataatccagccggagagt
gacggcagttggcatccggcaaaagtattcgtaaaccaatgcctgaaagagaatgcggat
tag
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