Dehalococcoides mccartyi CG1: X792_06505
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Entry
X792_06505 CDS
T03647
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dmx
Dehalococcoides mccartyi CG1
Pathway
dmx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
X792_06505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmx03400
]
X792_06505
Enzymes [BR:
dmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
X792_06505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
X792_06505
DNA repair and recombination proteins [BR:
dmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
X792_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_SprT
Auto_anti-p27
DZR
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AII58339
LinkDB
All DBs
Position
complement(1168742..1169554)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETVKNEIMPHLLGKKITRMEALWAKTLCPPETEFNKLVSGLQVTGLSRRGKYI
IISLSGGLFISVHLKMSGGLTAVKAETEQFPRFTRAVFHLENGEQVYFTDIRKFGRINLL
TSLDTILEKLGPEPLEEDFTPEVLGKRLSGRKGPIKAVLLDQKVLAGVGNMYADEALFKA
CLNPLRPADSLSEAEVTKLHSAIQSVLHKAIQNKGASVSTYHRPDGSKGGAQLEFNVAHR
RGEVCPECGAPITRQLIRQRACYFCPHCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcctgaagtggaaacggtaaaaaacgaaataatgccccatttgctgggc
aaaaagataacccgcatggaagcgttgtgggcaaaaacgctctgcccgcctgaaaccgag
tttaacaaactggtctcaggtttgcaggtaaccgggcttagccgccgcggtaagtatatt
atcatcagcttaagcggcgggctgtttatcagtgtgcatttgaagatgagcggcgggctg
acggcagtcaaggctgagactgaacagtttccccgtttcaccagagcggtctttcatttg
gaaaatggagagcaggtatacttcacagacatacgcaaattcgggcggataaacttactt
accagtctggacactattctggaaaaactgggacctgaacctctggaagaggattttacc
ccggaggtgcttggtaagcgtctttcggggcgtaaaggacctatcaaggccgttctcctt
gaccagaaggtgctggcaggggtgggcaatatgtatgcggacgaagctttgtttaaagcc
tgtctgaacccgctccgcccggctgacagcctgagcgaagcagaggtaacaaaactccat
tcggcaatccagtcagttttacataaagctatacagaacaagggggcaagtgtcagcact
tatcaccgtcctgacggctcaaagggaggcgcccagctggagtttaacgttgcccaccgc
cggggtgaggtttgccctgagtgtggtgcacctataacccgccagctgatacgccaacgg
gcctgctacttctgtcctcattgccaatcataa
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