Dehalococcoides mccartyi CG1: X792_06515
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Entry
X792_06515 CDS
T03647
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dmx
Dehalococcoides mccartyi CG1
Pathway
dmx03030
DNA replication
dmx03410
Base excision repair
dmx03420
Nucleotide excision repair
dmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X792_06515
03410 Base excision repair
X792_06515
03420 Nucleotide excision repair
X792_06515
03440 Homologous recombination
X792_06515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmx03032
]
X792_06515
03400 DNA repair and recombination proteins [BR:
dmx03400
]
X792_06515
Enzymes [BR:
dmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X792_06515
DNA replication proteins [BR:
dmx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
X792_06515
DNA repair and recombination proteins [BR:
dmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
X792_06515
NER (nucleotide excision repair)
GGR (global genome repair) factors
X792_06515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH
RecR_HhH
nSTAND_NTPase4
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AII58341
LinkDB
All DBs
Position
complement(1170179..1172890)
Genome browser
AA seq
903 aa
AA seq
DB search
MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF
DRKGPTFRHEMFKDYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA
TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEAAVRAKYGLGPEHI
ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEV
ARDSKILTTIVRDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGGENQLQGTP
DMFAAAPKIETRYTVADSQNIDSIVKRLANAKELALAVSGTPEEAMDARLTALALSSAAG
DACFVPAEFIGSASEGQMFTTEGHSGLAALLGDEKICKTAHNAKYLMNLLLSAGQEVKGL
DFDTMIAAHLLGEKNLAIKDLIFEHFGIEIADIENILTRNGKKTIFSEVQLSEAAQLAAD
YTFRLKGIFAAQLAETKLMDLFARVEMPLLPILLGMERTGIMLDTDLLKAMAEKTGRQIF
KLEEDIYAQAGHSFNIGSPQQLGRILFDELKLPVIKKTKTGYSTGAEVLEELKGKHRIVD
LILEYRMLVKLKSTYLDTLPRMVNPHTRRLHTSFNQTRTATGRLSSSEPNLQNIPVRGEM
GREIRRAFIAPPGTVLLAGDYSQIDLRVLAHLSQDPALIEAFQSDQDIHTATAARLLNVS
PSKVTKEQRRLAKTVNFGVIYGMSSYGLEQATELSLEEADKFIKAYFEKYPRVAVYFSEI
KQQVRTQGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAMVRLDE
KLKEEKLKSRLLLQVHDELIFEVPTAELGRMSDLLVETMSGAVAFEIPLKVELKSGANWG
DME
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctgtaatagtcctctttgacggtactaatctggtccaccgcgcgtatcat
gtacttcctccgcttgcaatccgcaaaacaggtgaagtagtgggtgccgcttttggtttc
gcctccatactgattaaagtcttaacagaccttaaaccggattgttacgccatatccttt
gacagaaaaggcccaaccttccgccatgaaatgttcaaagattacaaagcccagcgtccg
cctatgcctgacgaactggtcagccagctggggcgggtacgccagattgtagatgctttt
aatatgccggtatacgaacagagcggctttgaggctgatgatgtgctgggtacgctggca
accagagccgctgccgcaggtatggaggttattatagcctccggagacgcagattccatg
cagctggtcgggccggatatccgcattttgtatcccggtccggcaggttcttttgccagc
accagtttgtatgacgaggcggcggtaagggcaaaatacggtttggggccggagcatatt
gcagattacaaagcccttatgggtgacccgtctgacaatatccctggagtacccggcata
ggcccgaaaaccgcccagaaacttatagaagagtatggcggcatagaagatatttataaa
aatctggataaaataagcccgcccggtcttcagaaaaagctggcagacaatgccgaagta
gcccgtgacagtaaaatactgacaactatcgtgcgtgatttgccgcttgatttcagtatt
gaggaatgccgggcagagcactataaccgccagaaagtggtagacctattccgcgagctg
gagtttttcaggctgattgaccgcctgccgggaggggaaaaccagcttcagggtacgccg
gatatgttcgctgccgctccaaagattgaaacccgctatacggtggcagacagccaaaat
atagacagcatcgttaaacgcctggcaaatgccaaagagctggcgctggcggtttcgggt
actcccgaagaagctatggatgcccgcctgacggcactggcactttcaagtgcggcgggt
gatgcttgttttgtacccgctgagtttatcggcagtgcttcagaagggcagatgtttacc
accgaagggcattccggcttggcagctctgcttggtgatgaaaaaatatgtaaaaccgcc
cataacgccaagtaccttatgaatttgcttttatctgccgggcaagaagtaaaagggctg
gattttgataccatgattgccgcccatctgctgggtgaaaaaaatctggctatcaaagat
cttatctttgagcatttcggcatagagattgcggatattgaaaatatactgacccgaaac
ggcaaaaaaaccattttcagcgaggttcagctttcagaagcagcccagcttgcggctgat
tacactttccgcctcaaaggtatctttgccgcccagcttgccgaaaccaagctgatggat
ttatttgccagggtggaaatgccccttttgcccattctgctgggtatggaacgcaccggc
attatgctggatacagatttgctgaaggctatggctgaaaagacaggcaggcagatattt
aaactggaagaagatatctatgcccaggcagggcatagctttaacataggttccccccag
cagctggggcggatactctttgacgaactgaaactgccggttatcaaaaagaccaaaact
ggctattccaccggggcagaggtgcttgaagagctgaagggcaagcaccgtattgtagac
ctgatactggaataccgtatgctggtaaagctgaaatctacctatctggataccttgccg
cgtatggtaaacccgcatacccggcggctgcataccagtttcaaccagacccgtacagct
accggcaggttatcttcttccgagcctaatctgcaaaacatacctgtcaggggggaaatg
ggcagggagatacggcgggcatttattgcgcctccgggcacagtgctgctggcgggagat
tattcccaaatagacctcagggtgctggcccatctttcccaagaccccgccctgatagag
gctttccagagtgaccaggatattcacactgcgaccgctgccagattgctgaatgtatcc
ccgtccaaagtgactaaagaacaacgccgcttggctaaaaccgtaaatttcggggtgata
tacggcatgagcagctacgggttggaacaggctaccgagctttcgctggaagaagctgac
aagtttataaaagcctattttgaaaaatatccgcgggtggctgtttatttctcggagatt
aagcagcaggtgcgtactcagggttatgtggaaaccctgctgggcagacgccgctatata
ccggaaatcaattcacccaaccgtattttgcgtgaatcagccgagcgtatggctatcaat
atgccggtacagggaacatctgctgacattatcaagctggctatggtccggctggacgaa
aagcttaaggaagaaaagctgaaaagccgcctgctgcttcaggtgcatgatgagcttata
tttgaagtacccacagcagagcttgggcggatgagtgatttgcttgtagaaaccatgtca
ggtgcagttgcctttgaaataccgctcaaggttgagcttaaatccggggctaactgggga
gatatggagtaa
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