Dehalococcoides mccartyi CG1: X792_06830
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Entry
X792_06830 CDS
T03647
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dmx
Dehalococcoides mccartyi CG1
Brite
KEGG Orthology (KO) [BR:
dmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmx03016
]
X792_06830
Enzymes [BR:
dmx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
X792_06830
Transfer RNA biogenesis [BR:
dmx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
X792_06830
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AII58399
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All DBs
Position
1229642..1230223
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AA seq
193 aa
AA seq
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MAEELVRTFIAVELPPELKTALGSFQNSLSIPAQAVKWVNPESMHLTIKFLGDTPLSQIS
NIIKGLEKAAQVCHAFTLCTNHIGAFPSLSNPKVIWLGLEGETGKLNALFAEVEKNISGL
GFPAEQREFAPHLTLGRLRESASKIDLQTTAETLKTTPPVTKTSFKASHICLFKSQLLPA
GPIYTRLAQISLA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaagaacttgtccgcacgtttattgccgtagaactgccgcctgagcttaaaacc
gcactcggcagtttccagaattccctttccatacccgcacaagctgtcaaatgggtaaac
cccgaatcaatgcatctaaccatcaaatttttgggggataccccgttaagccaaatatca
aatatcataaaagggctggagaaagccgcacaggtctgccacgcctttaccctatgcacc
aaccatataggggctttcccctcactttcaaacccgaaggtaatctggctggggctggag
ggggaaaccggtaaacttaatgccctctttgcggaggttgaaaaaaatatttcagggctg
ggatttccggcagaacaaagggaattcgccccccacctgaccttaggacgtcttagggaa
agtgcttccaaaattgacctgcaaaccactgccgaaacccttaaaaccacaccccctgtt
actaaaaccagtttcaaagcctcgcatatctgcctctttaaaagccagcttttacccgca
gggccaatatacaccagactggcccaaatcagcctcgcctag
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