Dehalococcoides mccartyi CG4: X793_00025
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Entry
X793_00025 CDS
T03648
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dmy
Dehalococcoides mccartyi CG4
Brite
KEGG Orthology (KO) [BR:
dmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmy03032
]
X793_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
dmy03400
]
X793_00025 (gyrB)
Enzymes [BR:
dmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X793_00025 (gyrB)
DNA replication proteins [BR:
dmy03032
]
Prokaryotic type
DNA Topoisomerases
X793_00025 (gyrB)
DNA repair and recombination proteins [BR:
dmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X793_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AII58796
LinkDB
All DBs
Position
complement(3884..5812)
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AA seq
642 aa
AA seq
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MLDENKAKPGANAENYNASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDE
AMAGVCDRIKVIIYKDGSVSVEDNGRGIPIDIHPVTKISALETVMTVLHAGAKFGGKTYQ
VSGGLHGVGASVVNALAEWTTVKVRRNGKIYQQSYQRGKPSTPLEEVGVSDGSGTTTIFK
ADSQIFSTTEYDFETLTDRLREIAYLNKGLEVYIYDEQSDQERTYYFEGGITGFVRHLNR
NREVRHRQPIYITKKSDSTILEVAIQYNDGYSDSTLTFANCVNTIDGGTHLTGFRSALTR
AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES
AVTEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS
ERDASLCELFLVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAII
TALAAGIDNDFDPAKLRYNRLVLMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQP
PLYKIKIGSNEHWVYNDAEKETLLSQTKSNKVDIQRYKGLGEMSAEQLWKTTMDPASRTL
LEVKVEDAAKADQIFNLLMGGEVAPRKAFIQSHSKTVKNLDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgaaaataaagccaaaccgggtgcaaatgccgaaaactataatgccagtgat
atccaggtactggaaggtctggccgctgtccgcaaaagaccgggcatgtatatcggctct
accgaccagcgcggtttgcaccacctggtttatgaaattgtttataacagcgtagatgaa
gccatggccggggtatgtgaccgcataaaggtcattatttataaagacggcagcgtcagc
gttgaagataacggccgcggtatcccgatagatattcaccctgtgaccaagatttccgcc
ctggaaacagttatgaccgtcctgcatgccggtgccaaattcggcggcaagacctatcag
gtatccggcggtctgcacggggtgggcgcttcagtagtaaacgctctggccgaatggact
acggtcaaggtcagacgcaacggcaaaatctaccagcaaagctaccagcgcggcaaaccc
agcaccccgctggaagaagtgggggtatcagacggttccggcaccaccactatattcaag
gcggactcgcagatattttccactacggaatatgactttgagaccctgactgaccgtctg
cgggaaatagcctacctcaacaaagggcttgaggtatatatttatgacgaacagtctgac
caggagcggacgtattattttgagggcggcattaccggctttgtccgccacttaaaccgc
aaccgcgaggtacgccaccgccagcccatttatataaccaaaaaatcagacagcactata
ctggaagtagctatccagtacaatgacggctactcggattccacccttacctttgccaac
tgtgtaaataccattgacggcggcactcaccttaccggtttccgttccgccctgacccgg
gctttcaatgactatgcccacaagtcaaaattccttaaagacacggaccccaatctgatg
ggtgatgacgtacgcgaaggcatagtagccattgtcagcgtcaaactgcccgaaccccag
tttgagggacagaccaaaggcaagctgggcaatattgaaataaagagcttcgtggaaagt
gccgttaccgaacagctttccctgtatctggaagaacacccggatgataccaaacgtatt
ttggaaaagtgtatcaccgccgccaaggcccgtgaagccgcccgcaaagcccgtgacctg
attatccgcaagagcgctctggatacaggcactctgccgggcaagctggctgactgttcg
gaaagggatgcttcgctgtgcgaactctttctggtagagggtgattcggcaggcggttca
gccaaacaggggcgtaaccgccgctttcaggccatactcccgctgcggggtaaaatttta
aacgtagaaaaggcttcaccggacaagatgctggcccacgaggaaatcagggctatcatt
accgctctggcagccggcatagataatgattttgaccccgccaaactgcgctataaccgt
ctggtactcatgacagatgctgacgtggacggctcacatatacggacactccttttgacc
tttttcttccgccatatgccccggcttattaccgaaagccacttgtttattgcccagccg
cctctttacaagataaaaataggcagcaatgaacactgggtatacaacgatgccgaaaaa
gagaccctgctttcccaaaccaagagcaacaaagtggatatccagcgctataaaggtctg
ggtgaaatgagtgccgagcaactctggaagacaaccatggacccggccagccgcacattg
cttgaagtaaaagtggaagatgccgccaaggcagaccagatttttaacctgctgatgggc
ggtgaagtggctccccgcaaggcctttatccagtcccactccaaaacagttaagaatctg
gatatctaa
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