Dehalococcoides mccartyi CG4: X793_01370
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Entry
X793_01370 CDS
T03648
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dmy
Dehalococcoides mccartyi CG4
Pathway
dmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X793_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmy03400
]
X793_01370
Enzymes [BR:
dmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X793_01370
DNA repair and recombination proteins [BR:
dmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X793_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Trm112p
Zn_ribbon_6
AAA_16
FtrD-like
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AII59032
LinkDB
All DBs
Position
complement(272196..274643)
Genome browser
AA seq
815 aa
AA seq
DB search
MAFAELAVNTPVLRPGSFSYSIPAGLEIKPGQAVWAPFGPKIVQGIVLEVTEEPAFGQTR
EICGVISDTPLLSSHQLKLAKWISQTYLSSIYEAVALMLPPSFERQSLAYISLESSPPAA
AEKQPETLSPNMQKIFDRLKAKDITPQNELEKIFGKKTAQSAILKLINQGLVKRTYRISP
VRAKTKFEKHFRLSVQALAFIKNQTLPKLSPRQTQVFDYLRENPGGISKSGLNLLVKNNS
AVLKALEQKGLVSTEERQVFRQPVDYSRIPPLPHLELSPPQKKCLEFITRSLNTPPEDDQ
NPRTFLLHGITGSGKTEIYLQALAESLRLGKKAIVLVPEISLTPQTIARFAGRFPGQIAV
LHSRLSPGEQFDEWQRIKNGQADIVIGPRSALFAPLDKPGIIIIDEEHEWTYKQQDPQPR
YHTRTVANKMAEEYGAVLVLGSATPDIDSYFKARKGIYQLLELPERLTPYRGASLPKTEL
VDMRTELSEGNRSIFSRNLQASIEKVLANHEQAILFINRRGGASFIQCRDCGYVAMCKSC
DAPLTYHPDQENLVCHQCGRHYPNPLTCPVCGSRRIKYLGMGTQKLEEETRLAFPQAKLL
RWDSDVIKGKNTHQQIMDRFSCHQADILIGTQMVAKGLDLPDVTLVGVINADISLNLPDF
RAGERTFQLLAQVAGRAGRGISGGKVVIQTYSPENYAIRSAVCHDYPGFYAKEIVYRQAL
NNPPFRKLACLVFSHLNHDFCQQQAKLMAKTLREKADAVGLGNLEILGPAPAFIQRLRGR
YRYQLILRSPNPAEFLREINPGQGWSIDIDPYGLC
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttggcttttgccgaactggccgtaaacactccggtacttagaccgggcagtttttcctac
tctataccagcggggttagaaataaaacccggtcaggcagtctgggctcctttcgggcct
aaaatagttcagggcatagtccttgaagtaactgaagagccggcattcgggcaaacacgt
gaaatctgcggcgttatctctgatacgccgcttctttcttctcaccagctgaagttagcc
aagtggataagccaaacctatttatccagtatttacgaagcagtagccctcatgctgccg
ccgtcttttgaacgccaaagcctggcctatatcagcctggagtccagcccgccggctgca
gcggaaaaacaacctgaaaccctaagcccaaacatgcaaaaaatatttgaccggctaaag
gccaaagacatcaccccccaaaacgaactggaaaaaatattcggcaagaaaaccgctcaa
agtgccatacttaaacttataaatcaggggctagtcaaacgcacctaccggataagcccg
gtcagggcaaagaccaaatttgaaaaacatttccgcctcagcgtgcaggcactggcattt
attaaaaaccagaccctgccaaaattatccccccgccagacccaggtttttgattacctc
cgggaaaaccccgggggcatttccaaaagcgggttaaatctgctggtgaaaaataattcg
gccgtcttaaaggctcttgagcaaaagggtctggtaagtactgaagaacgccaggtattc
cgccagcctgtagattacagccggataccccccctgccgcaccttgagctaagccccccc
cagaaaaagtgccttgagttcatcacccgttcactgaatacccctcccgaagatgaccaa
aatccccgtacctttttactgcatggcataaccggcagcggtaaaaccgaaatatacctg
caggcactggctgaaagcctgcgtctgggcaaaaaggctatagtactggtacctgaaatc
tcccttaccccccagactatcgcccgttttgcggggcgtttccccggccaaatagccgtt
cttcacagccgcctcagtcccggggaacagtttgacgaatggcaaaggataaaaaacggt
caggcagatattgtaatcggcccgcggagtgccctgtttgcccctctggacaaaccgggc
attattataatagacgaagagcacgaatggacctataaacagcaggacccccaaccccgt
tatcatacccgcaccgttgctaataaaatggctgaagagtacggtgccgtactggtactg
gggagtgccaccccggatattgacagctatttcaaagcccgaaaaggcatctatcagtta
ctggaactgcccgaacgcctgaccccctaccggggtgcttccctgcctaaaacagagctg
gtagatatgcgcaccgaactctccgaaggcaaccgcagcatcttctcccgtaacctgcag
gcctctattgaaaaagtactggcaaaccatgagcaggccattttattcataaaccgccgg
ggcggtgccagttttatccagtgccgtgactgcggctatgtagccatgtgcaaaagctgt
gatgccccgcttacataccaccccgaccaggaaaatctggtctgccaccagtgcggcagg
cactacccaaaccccctcacctgcccggtctgcggcagccgccggattaaatacctgggc
atgggtacccagaaactggaggaagaaacaagactggctttcccccaggcaaagctgctc
cgctgggatagtgatgtcataaaaggcaaaaacacccaccagcaaataatggatagattc
agctgccaccaggcagatatacttatcggcacccagatggtagccaaagggcttgacctg
ccggatgttactttagtaggggtaataaatgcggatatcagcctgaacctgcctgatttc
agggcaggcgaacgcacttttcagctgctggcccaggtagccgggcgggcaggccggggt
atatcaggaggaaaagtagtcatccagacctacagccctgaaaactatgccatccggtca
gctgtctgccatgactatccgggtttttatgccaaagaaatagtctaccgccaggcactg
aataaccctcccttccggaaactggcctgtctggtattcagccatttgaaccatgacttt
tgtcagcagcaggccaaacttatggctaaaacccttcgggaaaaagcggatgccgttggg
ctaggcaatctggaaattttaggaccggcacctgcctttatccagcgtctgcggggacgt
tatagataccagctaatcctgcgttcgcccaacccggcagagttcctcagagagataaat
ccgggacagggctggagtattgatattgacccttatggtttatgttaa
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