Dehalococcoides mccartyi CG4: X793_02420
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Entry
X793_02420 CDS
T03648
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dmy
Dehalococcoides mccartyi CG4
Brite
KEGG Orthology (KO) [BR:
dmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmy03400
]
X793_02420
DNA repair and recombination proteins [BR:
dmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X793_02420
Archaeal homologous recombinant proteins
X793_02420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AII59233
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Position
complement(454011..456590)
Genome browser
AA seq
859 aa
AA seq
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MIPVKLKIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVVSLNEQEAEVSLDFEISGELYQVIRQRQRPKKAGANGQSLLSLFAIKDGKPLNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLSNILGLEIYDQLEDL
ARQAVREAEAKKLLIEQSIADGQEGLKSRPELAKDLELTRLDLTDGEEKLKTHLAKLEIF
RHKKHAFDTKQSACLQIEKDLRDISKDQALWLQNQQEIKERISTFEALNAQEEAILKGYK
EYSDCQSLYEKHNRILAKLRQLEKEKKPLEDAVYKEENSLKNTLTKYQEHLKMRQETAQT
LGKLEQEKTLSDQLHLELENEETALKARQTKLADMQGSLAGLETEYAGTAREINSLEEKL
KLLTEASESRCNCPLCETELGQDKLKLVFGKYRTEQDAKEKQQNSLKIKLEQLRLDIQTL
TAQIETETKRLNQKRRQYEGQLSVLEKGIADAKDAGTKAAKGRELISDIEKQLNERSYAV
SEQARLAVIEKEIQELNFDNAEYTQNQQTLAGLTHFEEQKRKLDEAQSRLPREKDSLEKT
ASALAELTARHDTKLNEQQTLQRELAELPALEQELETAEAGYKLLSQTQDTLRQQLGSLS
QKEEQLNELEKKLKKQEQDKEQTAKEIYYFGKLARAFGKKDGIQTMLIEDTLPELESGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAVRI
ALSRLLANRLGAPLRTLIIDEGFGTQDSTGIERLKEAINSIQDEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaactttatgtgctaccgcggcgaaattccgcct
ttttcttttaacggggtgcataccgcctgcatctgcggccagaacggggccggcaaatct
gctttgatagacgccattacctgggcactctggggaaaaagccgggctaaaagtgatgat
gacgtggtctctttaaacgaacaggaagccgaagtcagccttgattttgaaatttcaggg
gaactgtatcaggttatccgccagcggcagcggcctaaaaaagcaggggcaaacggacaa
agcctgctgagcctgtttgccataaaggacgggaaacccctgaatatcaccggggatacc
ctgacccaaacagagaaaaagataatttccatactgcatatggactatgacacctttata
aacagtgcttttctgcggcaggggcatgccaaccagtttacccagcagccccccggcaaa
cgcaaggaagtactctccaatatactggggttagaaatatatgaccagctggaagatttg
gccagacaggccgtacgcgaggcagaggctaaaaaactgcttatagagcagagtattgca
gacggccaagaagggctgaaatccagaccggaactggcaaaggatttagaacttactcgc
ctggacctgacagatggtgaggagaaactgaaaacccatcttgccaaactggaaattttc
aggcacaaaaaacatgcctttgatactaaacaaagtgcctgcctccagatagaaaaagac
ctgcgggatatatcaaaagaccaagccctttggcttcaaaaccagcaggaaataaaagag
cgtatcagcacctttgaagcactaaacgctcaggaagaagcgattctcaaaggctataag
gaatactcagactgccaaagcctgtatgaaaaacacaaccgaatactggcaaaattaagg
cagcttgaaaaagaaaaaaaaccgcttgaagatgccgtttataaagaagaaaacagcctg
aaaaacaccctgactaaatatcaggaacacctcaaaatgcggcaggaaaccgcccagact
ttgggcaaactggaacaagaaaaaaccctgtcagaccaactgcacctggagctggaaaat
gaagagactgccttaaaagcccggcaaaccaagctggcagatatgcaggggagtttagcc
ggactggagaccgagtatgccggtacagccagagaaataaactctctggaagaaaaacta
aagctgcttaccgaagcaagtgaaagccgctgcaactgccccctgtgcgaaaccgaactg
gggcaggacaaactcaaactggtattcggcaaataccggacagaacaagatgctaaggaa
aaacagcaaaacagcctaaaaataaagcttgagcagctaaggctggatatacagacccta
actgcccaaattgaaactgaaaccaaacgtttaaaccaaaagcgcaggcagtatgaggga
cagctgagcgtactggaaaaagggattgcagacgccaaagatgccggaaccaaagcggca
aaaggcagagagctgatttcggatattgagaagcagctgaacgaacgcagttatgccgtt
tccgagcaagccaggctggccgtaattgaaaaagagatacaggaactgaattttgataac
gccgaatacacccaaaaccagcaaactttggccggactgacccattttgaggaacaaaaa
cgcaaactggacgaggcacaaagccgcctgccacgggaaaaagatagcttggaaaaaacg
gcttcagccctggcagaactcaccgcccgccatgatactaaactgaatgaacagcaaacc
ctgcaaagagaactggctgaactgcccgcactggagcaggagctggaaacagccgaagcc
ggatacaagttactcagccaaacgcaggataccttgaggcaacaactgggttcgctcagc
cagaaagaagaacagctgaacgaacttgaaaagaagctgaaaaaacaggagcaggataaa
gagcaaaccgccaaagaaatatactactttggtaaactggccagagctttcggcaagaaa
gacggaatccagaccatgcttattgaagacaccctgccggaactggaaagcggggcagac
ctgctgctgtcacggatgactgacgggcgtatgcaccttagtatagaaacccagcgttcc
accaaaaagggagaccagaccgagactctggatataaatatctcggatgagctgggcacc
cgcaactacgaaacattcagcgggggtgaggctttcaggatagattttgcggtcagaatt
gccctgtcacgcctgctggcaaaccgtctgggcgcacccttgcggacgctgattattgat
gaaggcttcggcacacaggactcaaccggtattgaacgcctgaaagaggctataaactcc
attcaggatgaatttgataaaatactggtcataacccatatagatgacctgaaagattct
tttcctacccgcattgagatagataaaaccccgtcaggctcagctatacgcttaaactaa
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