Dehalococcoides mccartyi CG4: X793_06720
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Entry
X793_06720 CDS
T03648
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmy
Dehalococcoides mccartyi CG4
Pathway
dmy03030
DNA replication
dmy03430
Mismatch repair
dmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X793_06720
03430 Mismatch repair
X793_06720
03440 Homologous recombination
X793_06720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmy03032
]
X793_06720
03400 DNA repair and recombination proteins [BR:
dmy03400
]
X793_06720
Enzymes [BR:
dmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X793_06720
DNA replication proteins [BR:
dmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X793_06720
DNA repair and recombination proteins [BR:
dmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X793_06720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AII59996
LinkDB
All DBs
Position
complement(1236661..1240173)
Genome browser
AA seq
1170 aa
AA seq
DB search
MFCHLHVHTEFSLLDGMCRISQLVARAKELGMEALAITDHGTMHGIPRFYKEAKEAGIKP
VLGSEFYLAYGDRTAKTAADKNYYHLVLLAKNNKGYHNLIQLSSRSHIEGFYYKPRIDKE
LLEKYSEGLVCLSACPSGEVPRLILENRFDEAREAALWYKKTFENYYIEIQRHPMPDLEK
INSVLIPMARELDIPLVATNDTHYLDKEDAPYHDLLLCIGTNALVSDEKRMKMEGDYFYL
KSPEEMAEAYQDIPDAIENTAKIAEMCNVSLDFGRLHLPEIDIPAGKTPDEYLADLCYEG
LPKFYPDASQEILDRLKYELDVIKTTEFANYFLVTWDIIRFVKEKGLYYGVRGSAASSIV
LYCLGITALDPIKYKLVFERFLNIERKEMPDIDMDFQDDRREEVIEYVVGKYGRDHVSQI
ITFGTLGAKAAVRDVGRALGMAYADVDRVAKVIPFSLHMTLDKAMEESAELKDMYNQDSV
VRNLVDAARKIEGLSRHASTHAAGVVISKDPLTDHVPLQRLSKENNLGLVMTQYTMEDIA
KIGLLKMDFLGLVNLNILGKACAVIKEYTGQDIDPLAIPLDDAKTFELLAAGETVGVFQL
EGTGMRRYIKELKPTVFSDIGAMVALYRPGPMEQIPRFIKSKHGLEPITYPHPALEPILE
ETYGVIVYQEQVLFIAQTFSGYTLGQADILRKAMGKKIAAVMQKQKANFIDGALKNGYTP
EIAEEVFALVEPFAGYAFNKAHATSYALIAYQTAYLKANYPVEYITAYLQAFCDVTEKVV
TAVTEARHMGIEVLPPDINRSGVNFEIEQNEDGVKKIRFGLAAVKNVGVAAVEPIVAERK
ANGEYLSVEDLCRRAEGSSLNKRVMESLVKAGALDSLGDRGTLLFNLPNILSLAQREQKL
KDSNQTTMFDLFGQQSPMPMPSLEMAESPVITREKLQWEKELVGIFISEHPFTPYASAAQ
EVTTALCGQIDEELDNQPVTVAGMVASVRVSATREGKPFVMAEIEDLVGRVEVAAWPKVY
AATKALWEEGNILLVEGKAVVRGDRVSIHAEKVSRYQPETDKKAAPVFINAPQPKAEDKE
PPAPQLQRLVVCIQQTENEGRDIDCLNEVVEILKQYPGETEVRLCVVNHERVFILKMPDI
WVYYCPELKSKLAALVGSANVRLENNAPSG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtcatctgcatgtccacaccgaattcagcctgctggacggcatgtgccgtatc
tcccagctggtagcccgtgccaaagaacttggcatggaggcgctggctattaccgaccat
ggtactatgcacggtattccccgtttttacaaagaggccaaagaagcaggtataaaaccg
gtactgggcagcgaattctatctggcatatggtgaccgtaccgccaaaacagcggcagat
aaaaactattaccatctggtgctgctggctaaaaataacaaaggctatcacaaccttatc
caattaagttcgcgttcacacatagagggtttttactataaaccccggatagataaagag
ctgcttgaaaaatattcggaagggctggtctgcctttcggcctgtccttcgggggaagta
ccccgcctgatactggaaaaccgctttgacgaagccagagaggccgccctgtggtacaag
aaaacttttgaaaactactatatagaaatccagcgccaccccatgccggatttggaaaag
ataaacagcgtccttatacccatggcacgggagctggatatacctttggtagctaccaat
gatacccattatctggataaagaagatgccccttatcatgacctgctgctttgtataggc
acaaatgcgctggtcagtgacgaaaaacggatgaagatggagggtgattatttttacctg
aaatcacctgaagaaatggcggaagcctatcaggatataccggatgccattgaaaacacc
gccaagatagccgaaatgtgcaacgtaagcctggatttcgggcgtttgcacctgccggag
atagatatccctgccggtaaaaccccggatgagtatctggcagatctgtgttatgagggg
ctgcccaagttttatcctgatgccagccaggaaatacttgaccgcctgaaatatgagctg
gatgttattaaaaccaccgagtttgccaattactttctggttacctgggatattatccgt
tttgtaaaagaaaagggtttgtattacggcgtccgcggcagcgccgcttcgtctatagtg
ctgtactgtctgggtattaccgcccttgaccctattaaatataagctggtttttgagcgt
tttctgaatattgaacgcaaggaaatgcctgatatagacatggactttcaggatgaccgc
cgtgaggaggtcattgaatatgtggtgggcaagtacgggcgtgaccatgtttcccagatt
attacctttggtacgctgggggcaaaagcggcggtgcgggatgtggggcgggcgcttggt
atggcctatgctgatgtggacagggtagccaaggtcatacccttctcccttcacatgacc
ctggacaaggctatggaagaaagcgccgaactgaaagatatgtacaatcaggattcggtg
gtccgtaatctggtggatgccgcccgaaagatagaggggctttcccgccatgcttccacc
catgctgccggggtggttatttccaaagacccgctgacagaccatgtacccctgcagcgc
ctgagcaaagagaataatctgggtctggtcatgacccagtacaccatggaagatattgcc
aagattggcttgctcaaaatggattttctggggctggtcaacctgaatatacttggcaag
gcctgtgcggttatcaaagaatacaccgggcaggatattgaccccctggccatacccctt
gacgatgcaaaaacctttgagctgctggcggccggcgaaacggtgggtgttttccagctg
gaaggcacgggtatgcgccgctatattaaagagctgaaaccgaccgtgttttcagacata
ggcgctatggtggctttgtaccgccccggccctatggaacagataccccgttttatcaaa
tccaagcacgggcttgagcctatcacctacccccaccccgcccttgaacccatactggaa
gaaacttacggtgttattgtttaccaggagcaggtgctgtttatagcccagaccttctcc
ggctataccctgggacaggcggatatactccgcaaggccatgggcaagaagattgcggcc
gttatgcagaaacagaaagccaattttattgacggggctttgaaaaacggctatacccct
gaaatagccgaagaggtgtttgccctggttgagccctttgccggttatgcctttaacaag
gctcatgccaccagctatgcccttattgcctaccagacagcttacttaaaagccaactat
ccggttgagtatataaccgcctatcttcaggcattttgcgacgtgactgaaaaagtggta
actgccgttaccgaagcccgccatatggggatagaggtgctgccgccagatatcaaccgc
agcggggttaattttgaaatagagcaaaacgaagacggggttaagaaaatccgcttcggg
ctggcggcggtcaagaatgtgggggtggcggcggtggaaccgattgtggcagagagaaaa
gccaacggggagtatctgtctgttgaggatttatgccgccgtgcggaagggtcatcactt
aacaagagagtaatggaaagcctggtcaaagccggggcgctggacagcctgggtgaccgg
gggactctcctttttaatctgccgaatatactttccctggctcagcgggaacagaagctg
aaagattcaaaccagactaccatgtttgaccttttcggtcagcagtcacccatgcccatg
cccagtctggaaatggcggaatcaccggttatcacccgtgaaaagctccagtgggaaaaa
gagctggtaggcatatttatatctgaacacccttttaccccttatgccagtgcggctcag
gaggtaactaccgccctgtgcggacagatagatgaggaactggataaccagccggtaacg
gtggcgggaatggtggcttcggtgcgggtttcggctacccgcgaaggcaaaccgtttgta
atggcggaaatagaagatttggtggggcgggtggaagtagccgcctggcctaaagtatat
gccgcaactaaagccctctgggaggaggggaatattctattagtggaaggtaaagctgtg
gttcgtggagacagggtatcaattcatgcggaaaaagtaagccggtatcagccggaaaca
gataaaaaagcggctccggtatttataaacgctccccagccgaaggcggaagacaaagag
cccccggctccccagctgcagcggctggtggtctgtatccagcagaccgaaaatgagggc
cgggatattgactgcttgaacgaagtagtggaaatactgaagcaataccccggtgaaact
gaggtacggctgtgcgtggtaaaccacgaacgggttttcatattgaaaatgccggatatc
tgggtatactattgtccggagcttaaaagcaagcttgccgccctggtgggcagcgccaat
gtgaggctggagaataatgccccaagcggataa
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