Dehalococcoides mccartyi CG5: X794_01135
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Entry
X794_01135 CDS
T03649
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dmz
Dehalococcoides mccartyi CG5
Pathway
dmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X794_01135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmz03400
]
X794_01135
Enzymes [BR:
dmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X794_01135
DNA repair and recombination proteins [BR:
dmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X794_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Trm112p
nSTAND_NTPase5
Zn_ribbon_6
FYVE_2
DUF6257
Motif
Other DBs
NCBI-ProteinID:
AII60451
LinkDB
All DBs
Position
complement(222131..224578)
Genome browser
AA seq
815 aa
AA seq
DB search
MAFAELAVNTPVLRPGSFSYSIPLGLEIKPGQAVWAPFGPKIVQGIVLEVSDQPAFGQTR
EICGVISDTPLLSFHQLNLAAWISQTYLCSIYEALSPMLPPSFERRSVAYISLEPSPLNK
SEKPPAILSPSLQKIFDWLQTRDITPQTELENIFGKKTTQTAIPKLINQGLINRTYQISP
VRTQTKFEKHFGLSEQALAFIKDQTLPKLSPRQTEVFECLRENPQGISKSRLNLLVKNNA
AILKSLEKKELILTEEHQVFRQPIDYSHIETLPHLKLSPPQEKCLESINRSLNTPPEDDQ
NPRTFLLHGITGSGKTEIYLQALAEALRLGKKAIVLVPEISLTPQTIARFAGRFPGRVAV
LHSRLSLGEQFDEWQRIKNDQADIVIGPRSALFAPLDKPGIIIIDEEHEWTYKQQNSQPR
YHTRTVALKMTEEYGAVLVLGSATPDIDSYFKAQNGLYQLLELPERLTPYRGASLPKTEL
VDMRTELSEGNRSIFSRNLHASIEKVLAKHEQAILFINRRGGASFIQCRDCGYVAMCKSC
DTLLTYHPDQENLVCHQCGRHYPNPLTCPNCKSRRIKYLGMGTQKLEEETELAFPQAKLL
RWDSDVTKGKDSHQQIMDKFSRHQADILIGTQMVAKGLDLPGVTLVGVINADISLNLPDF
RAGERTFQLLAQVAGRAGRGLAGGKVVIQTYTPENYAIQSAVCHDYPGFYAKEIAYRREL
NNPPFQKLACLVFSHLNHDFCQQQAILLAQTLREKADSTGSGTLEILGPAPAFIQRLRGR
YRYQIILRSPNPANFLRDINLGQGWSIDIDPYGLC
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttggcttttgccgaactggccgtaaacactccggtacttagaccgggcagtttttcctac
tccatacctttggggttagaaatcaaacccggccaggcggtctgggctcctttcgggccc
aaaatagttcagggcatagtccttgaagtatctgaccagccggcatttgggcaaacacgt
gaaatctgcggcgttatctctgatacgccgcttctttcttttcatcagcttaacctagcc
gcatggataagccaaacctatttatgcagcatctacgaagccctttcccccatgctgcct
ccgtcttttgaacgccgcagcgtagcctatatcagccttgagccctcaccattgaataaa
agcgaaaaaccgcctgcaatcctcagcccaagtttacaaaaaatatttgactggttgcag
accagagatattacccctcaaactgaactggaaaatatattcggcaaaaaaaccacccaa
accgccataccaaagctgataaatcaggggcttatcaaccgaacctatcagataagcccg
gtacggacacaaaccaaatttgaaaaacatttcggcctaagtgagcaggcactggcattt
attaaagaccagactctgccaaagttatctccccgccagaccgaggtttttgagtgcctc
cgggaaaacccgcaaggcatttccaaaagccgtctgaatttgctggttaaaaataatgct
gcaatcttgaaatctctggagaagaaagagctaatactaactgaggagcatcaggtattc
cgccagccgatagattacagccacatagaaaccctgccccaccttaaactaagccctcct
caggaaaagtgtctggagtctatcaaccgttccctgaatactccgcccgaagatgaccag
aatccccgtacctttttattgcacggaataaccggcagcggtaaaaccgaaatatacctg
caggcgctggctgaagccctgcgtctgggcaaaaaagccattgtactggtaccggagata
tcccttaccccccagactattgcccgttttgccgggcgtttccccggcagggtggccgta
cttcacagccgcctcagtctcggtgaacagtttgacgaatggcaaaggataaaaaacgat
caggccgatatagtaatcggacccagaagtgccctttttgccccgctggataaaccgggt
atcatcatcatagacgaagagcacgaatggacatataaacagcagaactctcaaccccgt
tatcacacccgcacagtcgccctaaaaatgactgaagaatatggtgcagttctggtgctg
ggcagtgccaccccggatattgacagctattttaaagcccaaaacggcctttaccagttg
ctggaactgcccgaacgcctgaccccctacagaggtgcttccctgcccaaaaccgagctg
gtagatatgcgcaccgaactttccgaaggcaaccggagtattttctcccgcaacctgcat
gcttcgattgaaaaagtactggcaaaacatgagcaggccatccttttcataaaccggcgg
ggcggtgccagttttatccagtgccgtgactgcggctatgtagccatgtgcaaaagctgt
gatacactgcttacttaccaccctgaccaggaaaatctggtttgccatcagtgcggcagg
cattatcccaatcccctcacctgcccgaactgcaaaagccgccggattaaatatcttggc
atgggaacccaaaaactggaggaagaaaccgagctggcttttcctcaggcaaaactgctt
cgctgggatagtgatgttaccaaaggcaaagactcccaccagcagataatggacaaattc
agccgccatcaggcagacatactcatcggcacccagatggtagccaaggggcttgacctg
cccggagtaactctggtgggggtaataaacgcggatatcagcctgaacctgccggatttc
cgggcaggcgaacgcacttttcagctgctggcacaggtagccggacgggccggacggggt
ctggcaggcggcaaagtagttatccagacctacacacctgaaaattacgctatccagtca
gccgtttgccatgattatccgggtttttatgccaaagaaatagcctaccgcagagaactg
aataatccccccttccagaaattggcttgtctggttttcagtcatttgaaccatgacttt
tgtcagcagcaggctatacttttggcacaaacgcttcgggaaaaggctgattcgaccggt
tcaggcacgctggagattctggggccggctcccgcctttatccagcgcctgcggggacgt
taccgataccagataatcctgcgctcaccaaacccggccaatttcctccgggatatcaac
ctggggcaaggctggagtattgatattgatccatacggcttatgctag
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