Dehalococcoides mccartyi CG5: X794_02160
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Entry
X794_02160 CDS
T03649
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dmz
Dehalococcoides mccartyi CG5
Brite
KEGG Orthology (KO) [BR:
dmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmz03400
]
X794_02160
DNA repair and recombination proteins [BR:
dmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X794_02160
Archaeal homologous recombinant proteins
X794_02160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
NPV_P10
ABC_tran
DUF4320
RsgA_GTPase
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
AII60650
LinkDB
All DBs
Position
complement(402563..405142)
Genome browser
AA seq
859 aa
AA seq
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MIPVKLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVISLNEQEAEVSLDFEISGELYQVIRQRQRPKKAGTNGQSLLSLFSLQDEKPRNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLANILGLEIYDQLEDL
ARQAVREAETKNLQIEQSIEDGKESLKSRPELEEALNHTRQDLAEGEGKLKIQLAELEIM
RHKKHSFDTKQNTCRQLDNDLKDISKDQSRWIQTLQEIKQRISTFETLSAQKEAIFKGFQ
EYSVCQSLYDKHNRILAKLRQLENTKKPLEDAVYKEENNLKNTLGKYQERLKFRQDTAQT
LVILEKEKTQSDQLKTRLETEEAELKIQQNKLLNLQSSLARLETEHAVAVKEVNALEEKL
NLLAEAGENRCNCPLCETELGQDKLKLVFGKYKTEQDTQKNLQADLQEKLSQMQSDIQAL
LKYIETETNRLSHSHKQYERQISLLDKGIAEAKEAEIKAAEGRNLIAGIEKQLNERSYAT
AEQASLAVVEKEIQGLNFDNAEYTRNQQNLADLTPFEEKKRKLDEAINRLPLENDSLKKA
SSALAELTVRRDNKLNEQQTLLKELAELPVLEKELGEAETEYKSLSQRQDALRQQLGSLS
QKAEQINELEKKLKKQAQEKDQTTQEINYFGKLVRAFGKKDGIQTMLIEDTLPELENGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAIRI
ALSHLLANRLGAPLRTLIIDEGFGTQDTTGIERLKEAINSIQNEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaactttatgtgttaccggggcgaaataccgcct
ttttcttttaacgggatacatactgcctgtatctgcggtcaaaacggggcaggcaaatcc
gccctgatagatgccattacctgggcgctctggggaaaaagccgggctaagagtgacgat
gatgtgatttccctaaacgagcaggaagcagaagtcagccttgattttgaaatttcaggt
gaactttatcaggttatccgccagcgccaacgccccaaaaaggcagggacaaatggacaa
agcctgttaagccttttttcactccaagatgaaaaaccccggaatataaccggagacacc
ctgacccagactgagaaaaagataatctccatactccatatggactatgacacctttata
aacagcgcctttctgaggcagggacatgccaaccagtttacccagcaaccccccggcaaa
cgtaaagaagtgctggccaacatactggggttagaaatatatgaccagctggaagatttg
gccagacaggctgtacgtgaagcagaaaccaaaaacctgcagattgaacagagtattgaa
gatggcaaagaaagtctgaagtccagaccggaactggaagaagccctaaatcatacccgt
caagacctggccgaaggtgaaggcaaattaaaaattcagcttgccgagctggaaattatg
cggcacaagaaacatagctttgacaccaaacaaaatacctgccgccagttggataacgac
ctgaaggatatttccaaagaccaatcccgctggattcaaaccctgcaagaaataaaacag
cgtatcagcacttttgaaacactctctgcccaaaaggaagcaatctttaaaggttttcag
gaatactccgtctgccaaagcctgtatgataaacacaaccggatactggctaaactaagg
caactggaaaataccaaaaagccccttgaagatgccgtttacaaagaagaaaacaatctt
aaaaataccttggggaaatatcaggaacgcctgaaattcaggcaagacactgctcaaact
ctggtgatactggaaaaagaaaaaacccaatcagaccaactgaaaacccggttggaaact
gaagaggcggaactgaaaatccaacagaacaagctgcttaatctgcaaagcagcctggcc
agactggaaactgaacacgccgttgccgtcaaagaggtaaacgcacttgaagaaaaactg
aacctgctggctgaagcgggtgaaaaccgctgtaactgccctctatgcgaaactgaactg
ggacaagacaagctcaagctggtgtttggcaaatacaagacggaacaggatacccaaaaa
aacctgcaagcagatctgcaggaaaaactgagccagatgcaatcagatatacaagccttg
cttaagtacattgaaaccgaaactaaccgcctgagtcatagccacaaacagtatgaaaga
cagataagtctactggacaaagggattgcggaggctaaagaggctgaaataaaggcggcg
gaaggcagaaacctgattgcaggtattgagaaacaactgaacgaacggagctatgccact
gcggagcaggccagtctggcagtagtcgaaaaagaaatacagggactaaattttgataat
gccgaatatacccgaaaccagcagaatctggctgatttgaccccttttgaagaaaagaaa
cgtaaacttgacgaagcaattaaccgcctgccgctggaaaatgacagtctaaaaaaggca
tcctctgcactggcagagctgacagtccggcgtgataataaactaaatgaacagcagacc
ctgcttaaagagctggcggaattaccggtgcttgaaaaagaactgggagaagccgaaact
gaatataagtcactcagtcaaaggcaggatgccctgaggcaacaactgggttcactcagc
cagaaagcagaacagataaatgagctggagaaaaagctgaaaaagcaagcacaagagaaa
gaccagaccactcaagaaataaattatttcggtaaactggtcagagctttcggcaaaaaa
gacggaatccagactatgcttattgaagacaccctgcctgaactggaaaacggagctgac
ctgttgctgtcgcgtatgactgacggccgcatgcaccttagcatagaaacccagcgttcc
accaaaaagggagaccaaaccgaaactctggatataaatatctcggatgaacttggcacc
cgcaactatgaaacctttagcggcggtgaggctttcaggatagattttgcgatcaggatt
gccctgtcacacttgctggcaaaccgtctgggcgcacctttgcggacacttatcattgat
gagggatttggcacacaggacactaccggcattgagcgcctgaaagaggccataaactct
attcagaacgagtttgacaagatactggtcataacccatatagatgacctgaaagattca
ttccccacccgcattgagatagacaaaaccccatccggctcagctatccgcctaaactaa
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