Dehalococcoides mccartyi CG5: X794_04210
Help
Entry
X794_04210 CDS
T03649
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dmz
Dehalococcoides mccartyi CG5
Pathway
dmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X794_04210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmz03019
]
X794_04210
03016 Transfer RNA biogenesis [BR:
dmz03016
]
X794_04210
Enzymes [BR:
dmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
X794_04210
Messenger RNA biogenesis [BR:
dmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
X794_04210
Transfer RNA biogenesis [BR:
dmz03016
]
Prokaryotic type
tRNA degradation factors
X794_04210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_KhpA-B
OB_RRP5_4th
S1_RRP5
KH_PNO1_2nd
KH_2
OB_PDCD11
KH-I_KHDC4-BBP
Alg14
CsrA
Motif
Other DBs
NCBI-ProteinID:
AII61024
LinkDB
All DBs
Position
774227..776389
Genome browser
AA seq
720 aa
AA seq
DB search
MITANSFERTIGGRKLVIESGKLARLADAAITIRYADTELLVTLCSAKKPREGVDFLPLT
IDYEERMYAAGKIPGGFIRREGRPSEQAILAGRLTDRPLRPLLPKEWRNDLQIIITVIAS
DKENDADIWGVVGASTVLAMSEIPYEGPVGASRIGYINGEFVLNPTFAQLESSQLDLVVV
STRKAVVMIEAGSKEIPEDIMINAIEFAHKANQELIDLQDEIRAKLGKEKLPVPVLEIPE
EVKTAVAAFVKGRVNEALSHQDKTARENAVEGLQAELVAALSETFAEGDILAAYDKEIKK
AIRSTILEKDIRVNGRGIKQLRQLDAETGLLPRVHGSALFTRGDTQVMAITTLGSLQESQ
QLDGLSAEDTKRFMLHYNFAPFSTGEVKRSGSPGRREIGHGALAERALVPVLPTPEEFPY
TIRLVADVVGSSGSTSMGSVCSSSLSLMDAGVPVKKAVAGISIGLITGENDTYCTITDIE
GIEDNYGDMDFKVAGTRDGITAIQVDMKVKGISFDIIRDAIYQAKEARYNILDVMDKALA
QPKTELSPYAPRMYKINIDPSKIGSVIGSGGKTIRSIIEQTNTTVDIENDGTVVIGATDE
ASAKKAIKIIEDLTKDIEAGSIYTGKVTRIMTFGAFVEILPGKEGMVHISELADHRVEKV
EDIVKVGDDITVKVIEIDNQGRVNLSHRVILNPNAVPISRNRDSQPRRPGPFRPSDRSNS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttgataactgccaactcatttgaacgaactatcggcggcaggaaacttgttattgagagc
gggaaacttgcccgtcttgcagatgccgcgattactatccgctatgcggatactgaatta
ctggtaacactttgttctgccaagaaacctcgcgaaggggtagattttctccccctgact
atagattacgaagagcggatgtatgccgccggcaaaatccccggcgggtttatccgccgt
gaaggccgccccagtgaacaggctattttggctgggcgactgactgacagacctcttcgc
cctcttctccccaaagagtggcgcaatgatcttcagattattattaccgtaattgcttca
gacaaggaaaatgacgctgatatctggggcgtagtgggtgcttccacagttctggccatg
tctgaaataccatatgaaggtccggtcggagccagccgtattggatatataaacggtgaa
tttgtgcttaatcccacttttgcccagttggaatcaagccagctggatctggtggtagtc
agcacccgcaaagcggtggtgatgattgaagccggttccaaagaaattcctgaagacatt
atgattaacgctattgagtttgcccataaggcaaatcaagagcttattgacctccaggat
gaaatccgtgccaagctcggcaaagaaaagctacccgtgccggtgcttgaaatacccgaa
gaagtcaaaacggctgttgccgcttttgtaaaaggacgggtaaatgaagcccttagccac
caagataaaaccgcccgtgaaaatgcggttgaaggccttcaggctgaactggttgcggct
ttatcagaaacattcgccgaaggtgatatcctggccgcttatgacaaagaaatcaagaaa
gctatccgctctactatacttgagaaggatatccgggtaaacggacggggtatcaaacag
cttcgccagctggatgctgaaacagggcttttgccccgcgtccatggctctgctttattc
acccgcggtgatacccaggtcatggctataaccacccttggttctttacaggaatcccaa
cagctggatggcttaagtgccgaagataccaagcgttttatgcttcactacaactttgcc
cccttctctaccggtgaagtaaaacgttccggttctcccggacggcgtgaaatcggtcat
ggcgctttggccgaacgtgccttagtgcctgtcctgcccactccggaagaattcccctat
accattcgtctggtagctgacgtggttggctcatcaggctctacctctatgggcagtgtc
tgttcgtccagcctgtcacttatggatgcaggcgtaccggtcaaaaaagctgtcgcagga
atctccatcggccttattaccggtgaaaatgatacctactgcaccattactgatattgaa
ggcatcgaagataactacggcgatatggactttaaagttgccggtacccgtgacggcata
accgccatacaggtggatatgaaggtcaagggtatcagttttgatattatccgtgatgcc
atataccaggcaaaagaagcccgctataacatactggacgtaatggacaaagctcttgcc
cagcctaaaacagagcttagcccttatgcccccagaatgtacaagataaatattgacccc
tccaagattggcagtgttatcggcagcggcggcaaaactatccgctctattattgagcaa
accaatactaccgttgacattgaaaatgacggcacagtggttattggtgctactgacgag
gcttcggctaaaaaggccatcaagataattgaagacctgactaaagacatcgaagccggc
agtatttataccggtaaggtcacccgtataatgaccttcggtgcttttgttgaaatcctg
cccggaaaagaaggcatggtacacataagcgaactggccgaccatagagttgaaaaagtg
gaagatatagtcaaggtgggtgatgatataacggttaaggttatagagattgataaccag
ggcagggtaaacctgtcacacagggttattctcaacccgaacgctgtacccatttcacgc
aaccgtgattctcagccgcgtcgtcccggtcctttccgcccttctgaccggtctaactca
taa
DBGET
integrated database retrieval system
