Dehalococcoides mccartyi CG5: X794_04265
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Entry
X794_04265 CDS
T03649
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmz
Dehalococcoides mccartyi CG5
Brite
KEGG Orthology (KO) [BR:
dmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmz03016
]
X794_04265
Enzymes [BR:
dmz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
X794_04265
Transfer RNA biogenesis [BR:
dmz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
X794_04265
Prokaryotic type
X794_04265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AII61035
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Position
complement(785169..786071)
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AA seq
300 aa
AA seq
DB search
MDGILNINKPFGITSFDVVAKVRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLS
SVSKTYLAEIELGVETDSYDSEGEITFRKTCDYVTREMIYKTLMDFQGEIIQIPPMYSAV
KHRGMRLYNLARQGIEVERIPRVATIYGIELLNYTSPVLRVRIECGHGTYIRSLAFDLGR
KLGCGAYLKSLVREAYGQFNLANSLDFADLEAAKCDVKLAGILLPLETAIGHLPRVSLDE
ENITRLVNGLEITLDRIDKPEAVAVYNAENSFVAIIQPETDGTWHPAKVFIRQSPKPDAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcctgaatatcaacaaacctttcgggataacctcgtttgatgtagttgca
aaagtcaggcgtatttattcccaaaaaagggtagggcatgggggtactcttgacccgtat
gcaaccggagtaattccggtgtttttgggaagatctacccgtcttatagagtatctttcc
tccgtcagcaagacatatctggctgaaatagagctgggagtggagacggatagctatgac
agcgaaggcgaaatcactttccgcaaaacctgtgactatgttacccgtgaaatgatatat
aaaactttgatggattttcagggtgagataatccaaattccccctatgtatagtgccgta
aaacaccgcgggatgcgtctttacaatctggcaaggcaagggatagaggttgaaagaatt
ccccgggtagccacaatttatggcattgaactgcttaactacacttcaccggtactgcgt
gtacggatagaatgcggacacggcacatatattcgttctctggcctttgacttgggtaga
aaactgggttgcggggcgtatctgaaatctctggtaagagaggcatatggccagtttaat
ctggcaaactctctggattttgctgaccttgaggccgcaaaatgtgacgtgaaactggca
ggtattctcctcccgctggagacagccatagggcatctgccaagagtttcccttgatgaa
gagaatataacccgcttggtaaatggtctggagataacactggataggattgacaaacct
gaggctgtggccgtatacaatgctgaaaacagtttcgttgctataatccagccggagact
gacggtacttggcatccggctaaagtcttcataagacaaagcccgaaaccggatgcaaat
tag
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