Dehalococcoides mccartyi CG5: X794_06305
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Entry
X794_06305 CDS
T03649
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmz
Dehalococcoides mccartyi CG5
Pathway
dmz03030
DNA replication
dmz03430
Mismatch repair
dmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X794_06305
03430 Mismatch repair
X794_06305
03440 Homologous recombination
X794_06305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmz03032
]
X794_06305
03400 DNA repair and recombination proteins [BR:
dmz03400
]
X794_06305
Enzymes [BR:
dmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X794_06305
DNA replication proteins [BR:
dmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X794_06305
DNA repair and recombination proteins [BR:
dmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X794_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AII61410
LinkDB
All DBs
Position
complement(1144626..1148138)
Genome browser
AA seq
1170 aa
AA seq
DB search
MFCHLHVHTEFSLLDGMCRISQLVVRAKELGMEALAITDHGTMHGIPRFYKEAKEAGIKP
ILGSEFYLAYGDRTAKTAADKNYYHLVLLAKNNKGYHNLIQLSSRSHLEGFYYKPRIDKE
LLEKYSEGLVCLSACPSGEVPRLILENRYDEAREAALWYKKTFENYYIEIQRHPMPDLEK
INSVLIPMARELDIPLVATNDTHYLDKEDAPYHDLLLCIGTNALVSDEKRMKMEGEYFYL
KSPQEMAEAYQDIPDAIENTAKIAEMCNVSLDFGRLHLPEIDIPKGKTPDEYLADLCYEG
LPVFYPDAGPEILDRLKYELDVIKTTEFANYFLVTWDIIRFVKEKGLYYGVRGSAASSIV
LYCLGITALDPIRYKLVFERFLNIERKEMPDIDMDFQDDRREEVIEYVVGKYGRDHVSQI
ITFGTLGAKAAVRDVGRALGMAYADVDRVAKVIPFSPHMTLDKAMEESSELKEMYNQDAV
VRNLVDAARKVEGLSRHASTHAAGVVISKDPLTDHVPLQRLSKENNLGLVMTQYTMEDIA
KIGLLKMDFLGLVNLNILGKACAVIKEYTGQDIDPLAIPLDDQKTFELLAAGETVGVFQL
EGTGMRRYIKELKPTVFSDIGAMVALYRPGPMEQIPRFIKSKHGLEPITYPHPALEPLLE
ETYGVIVYQEQVLFIAQTFSGYTLGQADILRKAMGKKIAAVMQKQKANFVDGAMKNGYTR
EIADEVFALVEPFAGYAFNKAHATSYALIAYQTAYLKANYPVEYITAYLQAFCDVTEKVV
TAVTEARHMGIEVLPPDINRSGANFEIEQAEGGVKKIRFGLAAIKNVGVAAVEPIVAERK
ANGDYLSVEDLCRRAEGSSLNKRVMESLVKAGALDNMGDRGTLFFNLPNILSLAQREQKM
KDSNQTTMFDLFSQQSPVPMTNLELEESPVTTREKLQWEKELVGIFISEHPFTPYASSAL
EVTTALCGQIDEELHNQLVTVAGMVASVRVSATREGKPFVMAEIEDLVGRVEIAAWPKVY
NATKALWEEGNILLVEGKAVVRGDRVSIHAEKVSRYQPETEKKAAPVFINAPQPKSEEKE
PPAPQLQRLVVCIQQTENEERDIDCLNEVVETLRQYTGETEVRLCVVNHERVFILKMPDI
WVYYCPELKNKLAALVGSANVRLENNAPSG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtcatcttcatgtccacaccgaattcagcctgctggacggcatgtgccgtatt
tcccagctggtagtccgcgccaaggaacttggcatggaggcactagctattactgaccac
ggcactatgcatggcattccccgtttttacaaagaagccaaagaggcaggcataaaaccc
atactgggcagcgaattttatctggcatatggtgaccgcaccgccaaaactgcggcagac
aaaaactactaccatctggtactgctggctaaaaataacaagggctaccataaccttatt
cagcttagctcgcgttcgcatctggagggcttttactacaaaccccgtatagataaagaa
ctgcttgagaaatattcagaagggctggtttgcctttcggcctgcccgtcgggtgaagta
ccccgcctgatactggaaaaccgctatgatgaggccagagaagccgccctgtggtacaag
aaaacttttgaaaactactatatagaaatccagcgccaccccatgcctgatttggaaaag
ataaacagcgtccttatacctatggcacgggagctggatattcccttggtagctaccaac
gatacccactatctggacaaggaagatgccccctaccatgatttgctgctttgcataggc
acaaatgcactggtcagtgacgaaaagcggatgaagatggagggggaatatttttacctg
aaatcccctcaggaaatggcggaagcctatcaagatatacctgatgcaattgaaaacacc
gccaaaatagctgagatgtgcaatgtcagcctggacttcgggcgtctgcacctgccggag
atagatatacccaaaggcaaaacccctgatgagtatctggcagacttgtgctatgaagga
ctgccagttttttaccctgatgccggcccggagatacttgaccgcctgaagtacgaactg
gatgttatcaaaaccaccgagtttgccaattactttctggttacctgggatatcatccgt
tttgtaaaagaaaaagggttgtattatggtgtccgtggcagtgccgcttcgtccatagtg
ctttactgtctaggcataaccgcccttgaccccatcagatacaaactggtttttgagcgt
tttctgaatattgaacgcaaggaaatgcctgatattgatatggactttcaggatgaccgc
cgcgaggaggttattgaatacgttgtcggcaagtacgggcgtgaccatgtttcccagatt
attacctttggtacgctgggggcaaaagcggccgtgcgggatgtgggacgggcacttggc
atggcctatgccgatgtggatagggtagccaaggttatacctttctcccctcacatgact
ctggacaaggctatggaagaaagctccgagctcaaggaaatgtacaatcaagatgccgtt
gtccgcaatctggtggatgccgcccgcaaggtggagggtctttcccgtcatgcttccacc
catgctgccggcgtagtcatttccaaagaccccttgacagaccatgtacccctgcagcgc
ctcagcaaggagaataatctggggctggtcatgacccagtacaccatggaagacatagcc
aaaataggtttgctcaagatggactttctgggtttggtcaacctgaatatactgggcaag
gcctgtgcggtaatcaaagaatacaccggacaggatatcgaccccttggccatacccctt
gacgaccaaaagacctttgaactgctggcagccggcgaaacagtgggtgttttccagctg
gaaggtacgggtatgcgccgctatatcaaagaactgaaaccgacagtgttttcggatatt
ggtgctatggtggctttataccgccccggccctatggagcagataccccgttttatcaaa
tccaagcatgggcttgagcctatcacctatccacaccccgcacttgaacccctgctggaa
gaaacttacggggttattgtctatcaggagcaggttctcttcatagcccagaccttttcc
ggctatactctggggcaggcggatatactccgcaaggccatgggtaaaaagattgccgcc
gttatgcagaagcagaaagccaattttgtggacggggccatgaaaaacggctatacccgt
gagatagccgatgaggtatttgctctggttgaaccttttgccgggtatgcctttaacaag
gcccatgctaccagctatgcccttatcgcctatcagacagcctacctcaaggctaattac
ccagtggaatatataaccgcttatcttcaggctttttgtgacgtgaccgaaaaggtggta
accgccgttaccgaagcccgccatatggggatagaagtattgccgccggatattaaccgc
agcggggctaattttgagatagaacaagccgaaggcggggttaaaaaaatccgcttcggg
ctggcggctatcaagaatgtgggtgtggcggcagtagagcctattgtggccgaaaggaaa
gccaacggggactatctgtctgtggaggatttatgccgcagggccgagggttcatcactt
aacaagcgggtgatggaaagtctggttaaggctggggctttggataatatgggtgacagg
ggaactctctttttcaatttgccgaatatactttcattggctcagcgggagcagaagatg
aaagattcaaaccagactactatgtttgaccttttcagccagcaatcacccgtacccatg
actaatctggagcttgaagaatcaccggttaccacccgtgaaaaactccagtgggaaaaa
gagctggtaggtatatttatatctgagcatccgtttaccccctatgccagttcggctttg
gaggtaactaccgccctgtgcggccagatagatgaggaactccacaatcagctggttaca
gtagcgggtatggtggcttcggtgcgggtttcggccacccgcgaaggcaaaccgtttgtt
atggccgaaattgaagatttggtaggacgggtggaaatagccgcctggccgaaagtttat
aacgcaaccaaggccctctgggaagaggggaatattcttttagtggaaggtaaagctgtg
gttcgtggagacagggtatcaattcatgccgaaaaagtaagccggtaccagccggaaaca
gagaagaaagcggcaccggtatttataaatgccccccagccaaagtccgaggaaaaagag
cctccggctccccaactgcagcgtttggtggtatgtatccagcaaactgaaaatgaggaa
cgggatattgactgtctgaatgaggtagtggaaaccctgcggcaatatacgggtgaaacc
gaagtacggttgtgcgtggtcaaccacgagagggttttcatattgaaaatgcctgatatc
tgggtatactattgtccggagctaaaaaataagcttgctgccctggtgggcagtgccaat
gtgaggttggagaataatgccccaagcggataa
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