Dromaius novaehollandiae (emu): 112978998
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Entry
112978998 CDS
T07572
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
dne
Dromaius novaehollandiae (emu)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
NDNF
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
112978998
NCBI-ProteinID:
XP_025948628
Ensembl:
ENSDNVG00000014973
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MQIHTCFFFACLTVVSRVWGRVSSQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKP
MAGDSEQEVMLKTKTPKATVAGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQT
RNNRRNAGTMSEKNLTSSGSSAAEHSSVAEATPPPLNAVLTQTAKDRTEKKRQRGSQSKV
SGEAVRNQPSAEASVTETTPTSTKSSQRTPANSGRXSLGKEKPTKDSLKRGSQFQCDTSA
MIDIVLLVDGSWSIGRSNFKLIKEFLSTLISPFNIAQDEIRVGLSQYSSDPRTEWDLNTY
ATRDEVLEAVRSLRYKGGNTFTGLALTHVLEQNLKPESGARLEAEKLVILLTDGKSQDDA
NLVAQTLKNMGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGRLTRVLC
TRIKEKRNSESTGSTVKDIPGNSRPQLSPTDLRISAVTSKXMHLTWNPPLRPPKKYRIVY
YPSRGGIPKEVLLDGAVSSLQLANLTSHTEYLVSVFALYDTVVGDGLRGVTSTLPLSSPR
SLRVAELSHNSMRLSWKAAQGATQYLVLCSAAPRGAEDYTVEVKVAQPEVLLDGLSPSTE
YSVAVYAMYGEDASDPASIQETTLALSPPRYLSFSEISHASVRVSWEAASQAVKAHRVTY
VSSRGSNTGEVEVPGTASSTVLXPLSSFTQYFISVRSTYDEGDSFPITGNVTTLKVPPPR
ALKVTELSGNNLQLQWEAVAASDVVVYQIRWSXLGGEKSQELSVAGNVATTVLPSLQKNT
DYKISMWAYYKDGARSDTVSVQHRTNSRGPPTNLFIDSETPTSLQVHWKPPDGRIQHYKI
TYSPVSDDSARQTVMASGKSSSVTLQSLLPDRAYKVTISAVHNTGESESMSTTGRTAPVL
SKLPSIRGFVPSKAEACPTISSPEGSVRGFDMMEVFGLVEKEYASIKGVAMEPFVFSGSR
TYTLFRDTQLTQRTSDVHLFAIPPEHTISILLRLLPETSKEPFAVWQITDEDFQPLLGVI
LDSSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAE
KPINTIGSISSAGFIMLGKVTRTRGPRSGSASFQLQSLRIVCNSLGAEEDRCCDLPALRD
EETCPTLAPACTCTSGLPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPS
GQQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEG
TAGPPGPPGPRGFQGVTGSRGNSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLV
SQACERMIQTHVLKFDSFIHEHARKPVPVWEEKLKPGEPGPPGPPGPPGSNGERGENGIP
GQPGKDGYPGERGAPGPKGEKGMPGATEEGIQGPRGRTGPPGEIVLGKPGPKGSPGNAGP
QGFPGVRGHPGQSGYPGGCDMSGCYGTGRRDFIP
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcacacttgcttcttttttgcctgcctgactgtggtgagtcgtgtctggggc
cgagtgagcagccaagggtcaggtcgactgaagctcactgtcctttcggaagacaggctc
caaatgaaatggaaggaaaccgaagggaacatcaatggctacaaagttcgggtaaagccc
atggcaggggactcggagcaagaagttatgctgaaaaccaagactcccaaagccacagtt
gcggggttgagccctaccaaggaatacacgttgcaggtctatgtgcttaatggctcccag
gaagccctgtttgccaaaaggaaattcgtgattgaggagctcaaaaatgcatcccagacg
agaaataaccgaagaaacgcaggaactatgtcagaaaagaatctcacttcttcaggaagt
tcagcagctgagcacagctcagtggcagaggccactccaccacccctgaatgcagtcttg
acacagacagcaaaggacagaactgaaaagaaaaggcagagagggagtcagtcaaaggtc
tcaggtgaagctgtgagaaaccaacccagtgctgaggccagtgtgacagaaacaacacca
acaagcactaaatcatcgcagcgcactcctgcaaactcaggacgagratctctaggcaaa
gaaaaacccacaaaggattcgctgaagagaggttcccagtttcagtgtgacacgtccgca
atgattgatatcgtcctgcttgtggatgggtcttggagcatcggacgcagcaatttcaag
ctcattaaagagttcctgagcactttgatttccccgttcaatattgcacaggacgagata
agagtagggttgtcccagtacagtagtgatccccgcacagagtgggatttgaacacttac
gctacgagggacgaggtgctggaggccgtgcggagcttgcggtacaagggcggcaacaca
tttacaggccttgctttgactcatgtcctggaacagaatctaaaaccagaatctggtgcc
cgactggaggcagagaaattggtgatcctcttgactgacggaaaatcccaagatgatgcc
aacctggttgctcagaccttgaaaaacatgggtatagagatatttgccattggggtgaaa
aacgctgatgaggcagagctgaagcaggtggcctcggagccgctggagctcacagtgtac
aatgtgctggacttccccttgctgagctctctggttggcaggctcacccgcgtcttgtgc
accaggatcaaagagaagaggaacagcgaaagcacaggtagcactgtgaaagatatccct
gggaactcgagaccccagctgagcccaactgaccttagaatatcagctgtgacctctaag
rgcatgcacttgacctggaatcctcctctgagaccaccgaagaaataccgtattgtgtat
tatccatctaggggtggcatccccaaagaggtgcttttagatggagcagtctcctctttg
cagcttgccaacttgacttcgcacacagaatatttggtgtcagtgtttgcgctttatgac
actgttgtgggagacgggctgagaggcgtcacctccacattgcctctgtcttccccccgt
tccctgcgcgttgctgagctgagtcacaacagcatgaggctgagctggaaggcagcacag
ggagcgacgcagtacctggtgctctgctcagcagcccccagaggagcagaggactatacg
gtggaggtgaaagtggcccagcctgaggttctgctagacgggttgtcgcccagcacagag
tactctgtcgcggtgtatgcratgtatggggaagatgcgagtgatccagccagcatccag
gaaaccaccttggccttgagtcctcctagatacctgagtttctccgagatcagccatgca
tcggtcagagtcagctgggaggctgcgtctcaggcagtgaaagctcaccgcgtgacctac
gtctctagcagagggagcaacaccggagaggttgaggttcctggcactgcatcatccact
gtcctaaracctttgtcctcattcactcaatactttatcagtgtcagatctacatatgat
gaaggcgactcctttccaattactggcaacgttaccacgttaaaggtccccccaccacgt
gcactgaaggttaccgagctctcaggaaacaatctccaactgcagtgggaagctgtcgct
gcttcagatgtggttgtctatcagatcagatggagtaycctcggtggagagaagtctcag
gagctctcggtcgctggaaatgtggcaaccaccgttctgccaagcttgcagaagaacaca
gactataagatatccatgtgggcctattacaaagatggtgctcggagcgacacagtttcg
gttcagcacaggaccaattcccggggcccacccaccaacctcttcatcgactctgagacc
cccaccagcctccaggtccactggaaaccccccgatggccgcatacagcactacaaaatc
acctacagccctgtttctgatgacagtgctcggcaaacagtaatggcttctggcaaaagc
agcagtgtcaccctgcagtccctgctgcccgaccgagcctacaaggtgaccatttctgct
gtccacaacacaggagagagtgaaagcatgtccacaacaggccgaacggctcctgtattg
tctaaactcccttcaatacgaggatttgttccatctaaagcagaggcctgccccaccatc
agctctcctgaaggctctgtacgaggatttgacatgatggaagtttttggattagtagag
aaggaatatgcctccattaaaggagtagctatggagccgttcgtgttcagtggttcccgt
acctacactctgttcagagatactcagctcacccagagaactagcgacgtgcacctcttt
gcaatcccacctgagcacaccatcagcatcctgctccgcctcctgcccgagacctccaag
gagccctttgctgtgtggcaaataacagatgaggacttccagcccctccttggtgttatc
cttgactccagtaagaaatccttgacctatttcaatcatgactacaaggctgatttacag
gaagtctcctttgaccaacaggaagtgaagaagattttctatgggagctttcataaggtg
cacgtggcagtgagccatttcaagatcaaactctacctggactgtaagaaaatagcagag
aaacctatcaacaccattggtagcatctccagtgctggcttcatcatgctgggaaaagtg
acaaggactagagggccaagaagtgggtcagcatcgttccagctgcagtctttgcggatt
gtgtgcaacagtttaggggcagaggaagacagatgctgtgatcttcctgcattgagagat
gaagagacctgccctaccttagctcctgcctgcacttgtacatctggccttccaggctta
ccaggacctccagggccccctggcagccctggtaggagaggaccacaaggggaacaagga
gagccggggcctaagggtgaaccaggcccacccggacaagtggggccagagggtcctagt
ggccagcaaggctctccaggttcccaagggatcacggttcagggtcctgtgggaccacca
ggaattaaaggagagaaaggagacactggaagtcctggcatgcagggcattcctggtgtg
cagggagctccaggcagggatggtcttcaaggtgcaaagggggtgagaggactagaaggc
acagctgggcctccaggaccacctggaccaaggggtttccaaggagtgacaggctctcga
ggcaacagtggagagaaaggacctccaggtgacgttgggccaacagggcttccaggtcca
aaaggagaaagaggagagaaaggggaaccacagtccctggccacaatttaccagctagtt
agccaggcttgtgagcggatgattcagactcatgtgttgaagtttgactcattcattcat
gaacatgcaaggaaaccagttcctgtttgggaagaaaaattaaaaccaggagaaccagga
ccaccaggtcctccaggtccccctgggagcaatggagaaagaggagaaaacggcatccct
ggacagccaggcaaagatggatatcctggagaaagaggcgcaccggggcccaagggtgaa
aaagggatgcctggagccactgaggaaggaatccaaggacccagaggcagaacaggccca
ccaggagaaatagtgctggggaaaccaggtccaaagggttcccctggaaatgccggtcct
caaggttttcctggcgtcagagggcatcctggacagtctggatatccagggggttgtgat
atgtctggatgttatgggacaggtagaagagatttcatcccctga
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integrated database retrieval system
