Dromaius novaehollandiae (emu): 112979060
Help
Entry
112979060 CDS
T07572
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03015
mRNA surveillance pathway
dne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112979060 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
112979060 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112979060 (PABPC1L)
03041 Spliceosome [BR:
dne03041
]
112979060 (PABPC1L)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112979060 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
112979060 (PABPC1L)
Spliceosome [BR:
dne03041
]
Complex C
Other components
Complex C specific factors
112979060 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
RRM_7
RBD_DEAH11
RRM_RdRP1_2
RRM_3
ATP-grasp_2
DUF6262
DUF1464
Motif
Other DBs
NCBI-GeneID:
112979060
NCBI-ProteinID:
XP_025948736
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDNAGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVNLYVKN
LDDGIDDDKLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPAGYFLPPIPQQRILQLP
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctagcggtcccggataccccttagcctctctctacgtgggagacctscacccg
gacgtgactgaagccatgctctacgagaagttctcgcctgctgggccgataatgtccatc
agggtctgtcgggatgttgccacgcgccggtcgctgggctacgcctacataaacttccag
cagcctgcagatgccgagcgagccctggacaccatgaattttgaagtgatcaaaggccgg
cccatccgaatcatgtggtcccagcgagaccctgggctcaggaagtcgggggtcggaaat
gtcttcatcaagaacctagatgactccattgataacaaagccttgtacgatacgttctcg
gcattcggaaacatcctgtcttgtaaggtggtttgtgatgaaaatggatcccgcggttat
ggctttgttcactttgagactcatgaggcagcaactcgggccattgagaccatgaatggg
atgttgctcaacgaccggaaagtatttgttggccattttaaatcccgcaaagagcgtgag
gcggagtttggggctagggcaatggagttcaccaatgtctacatcaaaaactttggggat
gacatggatgatgacagactgcgggaaatattctccaagtttggaaagacgctmagtgtc
aaagtcatgatggacaacgctggccgctcaaagggctttggatttgtcaactttgagaag
catgaggaagcccagaaggccgtggctgacatgaacgggaaggagatcaacgggcggatg
gtgtatgtgggcagagcccagaagcggctggagcgccaaagtgagctgaagcggaagttt
gagcagatcaagcaggagagagtgagcaggtaccagggagtcaacttgtacgtgaagaac
ctggatgatggaatagatgatgacaagctgaggaaagagttctctccatayggcaccatc
accagtgcgaaggtgatgacagagggtggacacagcaaagggtttgggtttgtatgtttt
tcctccccagaagaggctactaaggccgtgacrgaaatgaatggacggatcgtcagcact
aagcctctctacgttgcacttgcacaaagaaaagaagaacggaaagcaattctcaccaac
cagtatatgcagagattagccaccatgagggccctgcctggccctctccttggctccttc
cagcccccagcggggtacttcctaccccctatccctcagcagcgtatcctgcagctaccc
cgatcctga
DBGET
integrated database retrieval system
