Dromaius novaehollandiae (emu): 112979480
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Entry
112979480 CDS
T07572
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03030
DNA replication
dne03410
Base excision repair
dne03420
Nucleotide excision repair
dne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112979480 (RFC1)
03410 Base excision repair
112979480 (RFC1)
03420 Nucleotide excision repair
112979480 (RFC1)
03430 Mismatch repair
112979480 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dne03032
]
112979480 (RFC1)
03400 DNA repair and recombination proteins [BR:
dne03400
]
112979480 (RFC1)
DNA replication proteins [BR:
dne03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112979480 (RFC1)
DNA repair and recombination proteins [BR:
dne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112979480 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_22
AAA_14
AAA_30
AAA_5
Rad17
AAA_16
RuvB_N
AAA_18
AAA_17
RNA_helicase
AAA_33
AAA_7
nSTAND3
NTPase_1
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112979480
NCBI-ProteinID:
XP_025949504
Ensembl:
ENSDNVG00000007849
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MDIRKFFGVVPPGKRQECETLKKNEKIKNGEGTSSGKKRGKETKVKNAPSEDDSKQKPTN
KKKRVIYDSDSEEEVQSVKKSKKPSEKEAAASKLGKVLKQDPVVYVSETDEDDDFINKRT
SLKPKENGTSAVGCPGTTTVKKEDVKLRAKSKPLSPVKLTPTSALDYFGTSSVQRSERKL
VASKRKEPSQSRDCTLDDEAIARQLQLDEDSELERQLHEDEEFARTLAMLDETPQKKKAR
KDSEEEQTVLSIKSSPNMTERYKQSQKVKATNSTDEAKNYTAKEQTTSENSKGSRLPLQS
SDGKIARELIDKTLPLKPSSKLVALKQKEESTEKERGTRSVLSKEKNASGKEEKRTPKKQ
KTSPQKPESVSPEDSEKKRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGV
LESIERDEAKSLIERYGGKVTSNVSKKTNYLVMGRDCGQSKCDKASTLGTKVIDEDGLFD
LIRTMPGKKSKYELAAETEAKKAESKHEKTPQKSEAGRRKFSPFKKEADNKKNKSTPDKG
GTFKSVKKETTAVRKLTDFKQQTVEKKKTPKSEGNLVSEMSEDGAERLLWVDKYKPMSLK
AIIGQQGEQSCANKLLRWLRNWHKNTSEDKQAKTNKFGGKDDGTSFKAALLSGPPGVGKT
TTASLVCEELGYSYVELNASDTRSKNSLKEVVAESLNNTSIRDFCSGTSSSVSGKHVLIM
DEVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQ
IKGAMMSIAFKEGLKIPPPAMHEIILAANQDIRQILHNLNMWCAKDKSLTYDEAKTDANK
AKKDIKLGPFDVVRKVFAAGEEASHMSLIDKSDLFFHDYSLAPLFVQENYIHVKPAAAGG
NLKKHLVLLSRAADSICDGDLVDRQIRSKQNWNLLPVQAIYSSVLPGELMRGYMSQFPVF
PSWLGKFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQSLKDFGTDGVQ
DAVAFMDSYCLVKDDVENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLHS
VKTSKRQSGSMLTSELSEDLNVEEIQSDEDEQDTVESDAMIKQKKVKSSRLLKTEKNEET
TKKEGKRKEKTRR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggggttgtacctcctggaaagagacaggaatgtgaaact
ctgaaaaagaatgaaaaaataaaaaatggggaagggacctcaagtgggaagaaaagggga
aaggagactaaggtgaagaatgcacccagtgaagatgattccaaacaaaagccaacaaac
aagaaaaaaagagtaatttatgattcagattcagaagaggaggtgcagtcagtgaaaaaa
tccaagaagccatctgagaaagaagcagctgcttcaaaacttggtaaagttctaaagcag
gatcctgttgtttatgtttcagagacagatgaagatgatgactttatcaataagagaact
tctctgaaacctaaagagaatgggacatcagcagttggttgcccaggaacaactacagtg
aaaaaggaagatgtaaaactacgagctaaaagtaaacctttatctccagtgaaactgacc
cccacctcagcacttgattactttgggacaagtagtgtccagcgatcagaaaggaaactg
gtagcaagtaaaaggaaagaaccttcacaaagcagagactgcacgctggacgatgaggcc
attgccaggcaactgcagcttgatgaagattcagagctggagagacagctgcatgaagat
gaagaatttgctagaacgttggctatgttggatgaaactccacagaagaaaaaggctcgg
aaagattcagaagaagagcaaacagttttgagcatcaagagcagtcctaacatgacagaa
agatataaacaatcccaaaaagtgaaagcaaccaactcaacagatgaagcaaagaattat
actgcaaaggagcaaactacatctgaaaactcgaaagggtctcgtttgcccctccagtca
tctgatggtaaaatagcaagagagttgatagataagaccttgcctttgaaacctagctct
aagcttgtggctctgaaacaaaaagaagagagcactgagaaggaaagaggtactcgaagt
gtattatcgaaggaaaaaaatgcttcggggaaagaagagaagagaacaccaaagaagcag
aaaacttctccccaaaagcctgagtctgtaagtcctgaggactctgaaaagaagcgaata
aattatcaggcctaccgaagctttctgaatcgtgagggtccgaaagctctgggctcaaaa
gagataccccaaggagctgaaaactgcttggaaggcctgactttcgtaattacaggagtt
ctggagtccattgaaagagatgaggccaagtctctgattgaacgttacggaggaaaagta
actagcaatgtcagcaagaagacaaactatctggttatgggacgagactgtggccaatct
aaatgtgataaggcatcaactttagggacaaaagttattgatgaggatggcctgtttgat
cttattcgaactatgccaggcaaaaagtccaagtacgaactggcggctgaaacagaggca
aaaaaagcggagtcaaaacatgaaaagacaccacagaaaagtgaagctggaagaagaaaa
tttagtcccttcaaaaaagaagctgataataaaaaaaataaatctactcctgataaagga
ggtaccttcaaatctgttaagaaagaaactactgctgttcgaaaacttacagactttaaa
cagcaaactgtagagaagaagaaaaccccaaagtctgaggggaacttggtttccgagatg
agtgaagatggagcagagagattactatgggtagataaatacaagcctatgtctcttaag
gcaataattggacagcagggtgagcaaagctgtgccaataaactgcttcgatggcttcgg
aactggcacaagaatacttctgaggacaaacaagcaaagaccaataaatttggaggcaaa
gatgatggtactagttttaaagcagcattactttccggtccaccaggagttggtaaaact
actacagcttctttagtttgtgaggaactggggtatagctatgtggagctgaatgccagt
gatactcgcagtaagaacagtctaaaggaagtagttgctgaatcacttaacaacaccagc
atcagagacttctgttctggcacatcctcatcagttagtgggaaacatgtattgataatg
gatgaagtggatggtatggcaggcaatgaagacagaggagggattcaggagttgattggt
ttaatcagacacacgaagatacctatcatctgtatgtgtaatgatcgaaaccatcctaag
attcgttctttggtccactactgttttgatcttcgttttcagagacctcgtctagaacag
attaagggtgccatgatgtctattgcatttaaagaaggcttaaaaatcccaccacctgct
atgcatgagataatcttggcagcaaatcaggacatcagacagattttgcataatcttaat
atgtggtgtgcaaaagataaatcattgacttatgatgaggccaaaacagatgccaacaaa
gccaaaaaggatatcaaactgggcccttttgatgtagtccggaaggtttttgctgctgga
gaggaggcttctcatatgtctcttatagacaaatcagatcttttcttccatgactattcc
ctagcacctctctttgtccaagagaactatatacatgtgaaaccagctgctgctggaggg
aatctgaaaaagcacttagtgctattgagtagagcagctgatagtatatgtgatggtgat
ctagtggacagacagattcgtagcaagcaaaactggaatcttcttccagtacaggctatt
tattcaagtgttctgcctggggagctgatgagaggttacatgtcccagtttcctgtcttt
cccagctggctggggaaattttcatccacaggcaaacatgatcgcatcattcaagaactg
gcaatgcacatgagtctcagaacccagacatgcaagaggacagtaaatatggagtactta
tcatatttgcgggatgcacttgttcagtccttgaaagactttggaacagatggtgtacaa
gatgctgtagcattcatggactcttactgcttggtgaaagatgatgttgaaaatataatg
gagataagcacctggggaggcaaacctagtcctttctctaagctggatcctaaggtcaaa
gcggcttttacacgggcctacaacaaagaggcacatctgactccatattcactgcattct
gtcaagacatcaaaaaggcagtcaggatccatgttgacttcagaactgagtgaagacctg
aatgtggaagagatccaatctgatgaggatgagcaagatactgttgaaagtgatgcaatg
attaagcaaaaaaaagtaaagtcttctaggctgctgaaaacagagaaaaatgaagaaaca
acaaaaaaagaagggaaaagaaaagagaaaacaagacgttaa
DBGET
integrated database retrieval system
