Dromaius novaehollandiae (emu): 112980032
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Entry
112980032 CDS
T07572
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112980032 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dne03400
]
112980032 (MSH2)
DNA repair and recombination proteins [BR:
dne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112980032 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
112980032
NCBI-ProteinID:
XP_025950415
Ensembl:
ENSDNVG00000016488
UniProt:
A0A8C4PCV3
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVEPPREAVWPEGAGAEAGFVRAVLSLPDKPDTTVRFFERGDYYTVHGGDARLAARELF
RTRAVIRQLAGAPGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSTKENDW
YLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETTGEMGKLRQVIQRGGILITDRKKAEFTTKDI
VQDLNRLLKSKKEEQMNSAALPEMEKQVAISSLSAIIKFLELLSDESNFGQFELTTFDLS
QYMVLDNAAVQALNLFQSSMENAGTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIE
ERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNV
VQAIEKHEGDHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEENMQSFLKSAAKELGLEASKSIKLESNSQFGHHFRITCKEEKVLRNNS
KYRIIDTQKNGVKFTNSKLSSVNEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAQLDAIVSFAHVSNGAPVPYVRPVILEKGRGRIVLKGSRHPCIEVQDDVAFIPNDIMF
EKGKQLFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIATKICAF
CMFATHFHELTALADQVPTVNNLHVTALTTDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIESAREKALELEEFQNIGKSKESEGEPPAKKPYREREEGEKIIQDFLCQVKALPLTD
MSEEDIKTKLKQLRTEVLAKNNSFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggagccgccgcgggaggccgtgtggcccgagggcgcgggcgccgaggcgggc
ttcgtgcgcgccgtgctctcgctgcccgacaagcccgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggtgcacggcggtgacgcgcggctggccgcccgcgagctcttc
cgcacccgcgccgtcatccggcagctggcgggggcaccgggaaatcagaaactggagagt
gtcgtgcttagtaaaatgaactttgaatcttttgtgagagatctgcttctggttcgtcat
tacagagttgaagtttacaagaacaaagcagggagtaaatctaccaaagaaaatgactgg
tatttggcatacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgcc
aacaatgatatgtcaacagccattggggttgtgggggtgaagctgtctactactgatgga
caaagagtagttggagtggggtatgttgatactacactgagaaaattgagcgtctgtgag
tttccagataacgatcagttctcaaaccttgaagctctgctggttcagctaggacctaag
gagtgtgtgctaccaggaggcgagactactggagagatgggaaaactacgacaagtcatt
cagagaggaggaattctgattacagacagaaagaaggcagagttcacaacaaaagatatt
gttcaggatctcaatcgcttgttaaaatcaaaaaaagaagaacaaatgaatagtgcagca
ttgccagagatggaaaagcaggttgccatttcatctttgtcagctattatcaagttttta
gagttgctgtcagatgagtctaattttggacaatttgaactgactacttttgatcttagt
caatatatggttcttgataatgcagctgtccaagctctcaatcttttccagagttctatg
gaaaatgctggtactgcacagtcactagctggtttactaaataaatgcagaacccctcaa
ggacaaagactggttaatcagtggattaaacagccacttatggacaagaatagaattgaa
gaacggttgaatttggttgaagcctttgtggtagatccagaactacgtcagtgccttcaa
gaagatcttttacgtcgcttcccggatctcaacaggctagcaaagaaatttcagagacaa
gcagcaaccttacaggactgttaccgaatgtatcaggctattaatcaactgcctaatgtt
gtacaagcaatagaaaaacatgaaggagatcaccagatgttgttgttggcagtgtttata
acaccgcttaatgatatccactctgacttctcaaagtttctggagatgatagaaacaaca
ttagacatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgatcctaac
ttgacagaattaagagagaagatgaatgaactggaagaaaacatgcagtccttcttaaag
agcgcagccaaagaactaggtttggaagctagcaaaagtatcaaactggagtcaaattca
caatttggacatcattttcgaattacttgcaaggaagaaaaagttctccggaacaattca
aaatacagaataattgatacacagaagaatggtgtgaaattcactaacagcaaactaagc
tccgtcaatgaagaatatataaagaacagagaagagtatgaagaggctcaggatgcaatt
gttaaggaaatcattaacattgcttcaggttatgcagagccaatacagacaatgaatgat
gtgatagctcaattagatgcaattgtcagttttgctcacgtgtcaaatggagcaccagtt
ccgtatgtccgtcctgtcattctggaaaagggacgaggaagaattgtgctgaaaggttcc
aggcatccttgcatcgaagtgcaagatgatgtagccttcatccccaatgacattatgttt
gagaagggcaagcagctgttccacattattactggccctaacatggggggtaagtcaaca
tacatccgacagaccggggtgatagttcttatggcccaaattgggtgttttgtaccatgc
gactctgcagaaataaccattgtggattgtatcctggctcgggtaggagctggagacagt
cagctgaaaggcgtgtctactttcatggctgaaatgttagaaactgcatcaatccttagg
actgcatctgaaaactccctgataatcattgatgagttgggaagaggaacttctacctat
gatggctttggcttagcatgggctatttcagagtacattgctaccaaaatttgtgctttc
tgtatgtttgctacacattttcatgaactgacagcccttgctgaccaagtgcccacagtt
aataacttacatgttactgctctgaccactgatgacacactgacgatgctttaccgtgtc
aaggaaggtgtttgtgaccagagttttggaatacatgtagcagagttggcagcttttcca
aaacatgtaatagagagtgcaagagagaaggcattggagctagaggagtttcaaaacatt
ggcaaatccaaggaatctgaaggagaaccaccagccaagaaaccttacagagaaagagag
gaaggtgaaaaaataattcaggattttctttgtcaagtgaaagcattgcccctgacagat
atgtcagaagaagacatcaaaaccaagctgaagcagctgaggactgaagtgttggcgaag
aacaacagttttgtgaatgaaataatttcccgaacaaaagttacatcatga
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