Dromaius novaehollandiae (emu): 112980263
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Entry
112980263 CDS
T07572
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dne
Dromaius novaehollandiae (emu)
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dne03021
]
112980263 (CHD1)
03036 Chromosome and associated proteins [BR:
dne03036
]
112980263 (CHD1)
Transcription machinery [BR:
dne03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112980263 (CHD1)
Chromosome and associated proteins [BR:
dne03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112980263 (CHD1)
SLIK complex
112980263 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
112980263
NCBI-ProteinID:
XP_025950765
Ensembl:
ENSDNVG00000004884
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQQKAASSDSGS
EEDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESD
YEPKNKVKSRKPPSRIKPKSGKKSAGQKKRQLDSSDDDDDDDDDDYDKRGSRRQATVNVS
YKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADG
DPNAGFEKSKEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPPYIGGHESLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKS
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSGPERAGGRLGKVKGPTF
RISGVQVNAKLVISHEEELAPLHKSIPADPEERKRYVVPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEA
QRLAGAGNSKRRKTRTKKNKVLKAAKLKEEIKSDSSPPPSEKSDDDDDEDNKDEIVSVKH
PHKKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDIKE
KRENKVKESTQKEKEVKEEKANETKSENKEKTKKIPLSDTPVHITATSEPVPISEESEEL
DQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPE
QIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDV
ERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRD
WDHYKQDSRYYSDSKHRKLDDHRSRDHRSNLEGCLKDSRPHSDHRSHSDHRIHSDHRSTS
EYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTP
EHSWSSRKT
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgtaagaaacagtagtggagagtcaagccgatca
gatgatgattctgggtcagcatcaggttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagccagtcaggtagcagtgactctgactctgggtccgagtcaggcagt
caatcagaatcggagtctgacacatctagagagaagaaacaagttcaagctaagccacca
aaagttgatggatctgagttttggaagtccagtccaagtatacttgccgtgcagagatca
gcagtgctcaagaagcagcagcaacagcaacaaaaggcagcttcatcagacagtggttca
gaagaggactcatctagtagtgaagattctgcagatgactcatccagtgaaaccaagaag
aaaaaacataaagatgaagattggcaaatgtctgggtcagggtcagtatcaggaactggc
tccgattctgaatcagaggaagacagggagaaaagcagttgtgaagagagtgaatccgac
tatgagccaaaaaacaaggtcaaaagccggaaacctccaagcagaattaagccaaaaagt
ggcaaaaagagtgcaggacagaaaaagaggcagcttgattcatcggatgatgatgatgac
gatgatgacgatgattatgataagagaggatctcgtcgccaggcaacagtcaacgttagt
tataaagaagctgaagaaactaagacagattctgatgacttgctggaagtctgtggagaa
gatgtcccgcaacctgaagaagatgaatttgaaactatagagaagtttatggatagtcga
attggcagaaaaggagccacgggtgctgcaaccaccatctatgcagtcgaggcagatggc
gatccaaatgctgggtttgaaaagtccaaggagccaggagaagtacaatatcttattaaa
tggaaaggctggtcccacatccataatacttgggaaactgaggaaacgctgaagcaacaa
aatgttaaaggaatgaagaaactggacaattataagaaaaaggatcaggaaacaaaacga
tggctgaaaaatgcttctccagaagatgtggaatattataactgccagcaggaacttaca
gatgatctacataaacaatatcaaatagtggaaagaataattgctcattcaaatcagaaa
tcagcagctggatatccagattactattgcaaatggcagggtctgccttattcagaatgt
agctgggaagatggtgctctcattgctaaaaaatttcaggcccgcattgatgagtatttt
agcagaaatcaatccaagaccactccctttaaggactgcaaggttctaaaacagaggcca
aggtttgttgcactaaagaagcaaccaccttatattggagggcatgagagtttagaatta
agagattatcagttaaatggactgaactggcttgctcactcatggtgcaaagggaatagt
tgtattcttgcggatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaac
tacctgtttcatgaacatcaactgtatggacctttcttgctggtcgtgccactttctacc
ttgacatcttggcaaagagagattcagacttgggctcctcagatgaatgctgtggtttac
ttaggagatataactagcagaaatatgataagaactcatgaatggatgcatccacagacc
aagcgattaaaatttaatatacttctaacaacttatgaaatcttgctgaaggataagtcg
ttccttggtggtctgaattgggcatttataggagttgatgaagctcatcgtttaaaaaat
gacgattcccttctgtacaagactttaatagactttaagtctaaccatcgtcttcttatt
actggaacccctctgcaaaactccctcaaagagctttggtctttgctccacttcatcatg
ccagaaaagttttcttcctgggaagattttgaagaggagcatggcaaaggcagagagttt
ggttatgcaagtcttcacaaagaacttgaaccatttctactgagaagagttaaaaaagat
gtagaaaagtctttacctgctaaggttgaacaaattttgaggatggaaatgagtgcattg
cagaagcaatattacaagtggattttaaccaggaattataaagccctgagtaaaggttca
aaaggcagtacgtcaggctttttgaacatcatgatggaactcaagaagtgttgtaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttaatacgtagcagcgggaaactaatccttcttgacaagctactgattcgtctacga
gaacgtggcaacagagttttgattttctctcagatggtgaggatgctggacatcctagca
gagtatttgaagtatcgccagtttccctttcagagactcgatggatcaataaaaggggaa
ttgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgcttttta
ctgtctaccagagctggaggattaggtataaacttggcgtctgctgacactgtagttata
tttgattctgactggaatccacagaatgatctgcaagcgcaggctagagcccataggatc
ggacagaagaaacaggttaatatttatcggctagtcacaaaaggatcagtagaagaggat
attcttgaaagagccaagaaaaagatggtgttagatcatttagtaattcagagaatggac
actacagggaaaactgtgctacatacaggttctactccttcgagctcaacaccatttaat
aaggaagagttatcagcaattttgaagtttggcgctgaggaactatttaaagaacctgaa
ggggaagaacaggaaccccaggaaatggatatagatgaaatcttgaagagggctgaaaca
cgggaaaatgagccaggcccattaactgtaggagatgagctgctttcccagtttaaggtg
gccaacttttccaatatggatgaagatgacattgagttggaaccagaacgaaattcaaga
aattgggaagaaatcattccagaagtccagcgacgaagaatagaagaggaggaaagacaa
aaagaacttgaagaaatatatatgctcccaaggatgagaaactgtgcaaaacagatcagc
tttaatggaagtgaaggaagacgcagtaggaacagaagatattctggatctgatagtgac
tccatctccgaaagaaaacggccgaaaaaacgtggaagaccacgaactattcctcgagag
aatattaaaggatttagtgacgcagagattagacggtttatcaagagttacaagaagttc
ggtggcccccttgaaaggttagatgctatagctagagatgctgagctagttgataaatct
gagacagaccttaggcgtctgggagagcttgtacataatggatgtattaaggctttaaaa
gacaattctggaccagaaagagcaggaggtagacttgggaaagttaaaggcccaacattc
cgaatatcaggagtgcaagtaaatgcaaagctggtcatctctcacgaggaagagttggca
ccattgcataaatccattcctgcagatccggaagaaaggaaaagatatgtcgtcccatgc
cacaccaaggcagctcattttgatatagattggggtaaggaagatgattccaatctgtta
ataggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcctgatctc
agtttgacacagaagattttacctgacgatccagataagaaaccccaggccaagcaatta
cagacccgtgcagactacctcattaaattactgaataaagaccttgcaagaaaggaagca
caaagacttgctggtgcaggcaattcaaagaggaggaaaacaagaactaagaagaataaa
gtgctaaaggctgcaaaattaaaagaagaaataaaaagtgactcctctccaccaccctca
gaaaaatctgatgatgatgatgatgaggataacaaggatgagattgtttcagtgaaacat
ccacataaaaaaataaaagcagaaaaagaaaatgaagaaaagcctgagccagatattggt
ataaagaargaagctgaagaaaaaagagagacaaaagaaaaggaaaataagagggatttg
aaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatattaaagaa
aagagagaaaacaaagttaaagaatccacacagaaagaaaaagaagtaaaggaagagaag
gcaaatgaaaccaaatctgaaaataaagaaaaaactaaaaaaattccattgtcggatact
ccagttcatattacggcaactagtgaaccagttcctatatctgaggaatctgaagaactt
gatcagaagacgttcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattgaaa
cagctggatagaccagagaaaggcctttctgaaagggaacagctagaacatactaggcag
tgtctaatcaaaattggggatcacattactgaatgtctaaaggagtacacaaatcctgaa
caaattaaacaatggaggaaaaatttgtggatatttgtctctaagtttacagaatttgat
gctagaaagctgcacaaactgtacaaacatgcaatcaaaaaacgccaagagtctcagcaa
cacaatgaccagaatattagcagcaatgtgaatacacatgtaattagaaatccagatgtg
gaaagactgaaagagaatacaaatcatgatgacagtagcagggacagttattcttctgat
agacatctgtcacaataccatgatcatcacaaagacaggcatcagggagatgcatataaa
aaaagtgactctaggaaaaggccctattcagccttcagcaatggaaaagatcatagagac
tgggatcactacaaacaagacagcagatactacagtgatagtaaacacagaaagttggat
gatcacaggagcagagatcacaggtcaaacctggaaggatgtttaaaagacagtcggcct
cattcagaccaccgttcycattcagaccacaggatacattcagatcaccgttccacttca
gagtacagtcatcataaatcttccagagattataggtaccactcagactggcaaatggac
cacagagcttctggtagtggcccaaggtcaccattagatcagaggtctccttatggttca
agatctcccttaggacacagatctccatttgaacactcatcagatcacaaaagtacacct
gaacattcatggagtagccggaaaacataa
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integrated database retrieval system
