Dromaius novaehollandiae (emu): 112980560
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Entry
112980560 CDS
T07572
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03022
Basal transcription factors
dne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112980560 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
112980560 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dne03021
]
112980560 (ERCC3)
03400 DNA repair and recombination proteins [BR:
dne03400
]
112980560 (ERCC3)
Enzymes [BR:
dne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112980560 (ERCC3)
Transcription machinery [BR:
dne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112980560 (ERCC3)
DNA repair and recombination proteins [BR:
dne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112980560 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
112980560
NCBI-ProteinID:
XP_025951290
Ensembl:
ENSDNVG00000018787
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGRKERDKKKSKKRHYEEDDEEDDDAPGKESQEAVPSAAGKQVEESGARVDEYGAKDYRL
QMPLKGDHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIRDCRLRNAEGEETELITETFTSKSAISKSSEGGLGPSTSQGTDAQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEA
ERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSAQVSRRAGTMSSMSGADDTVYMEYHSSRSKASSNKHVHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaggagcgggataagaagaagtccaagaagcgccattacgaggaagacgac
gaggaggacgatgacgctccgggcaaggagtcgcaggaagcggtgccctcggcggccggg
aagcaggtggaggagagcggcgcgcgcgtggacgagtacggcgccaaggactaccggctg
cagatgccgctgaagggcgaccacgcctcgcggcccctctgggtggctcctgatggccat
atctttttggaagccttttctccagtttacaaatatgcgcaggattttttggttgctatt
gctgagccagtgtgcagaccaacacatatacacgaatacaagctgactgcttactcgctt
tatgctgctgttagcgttggcttacaaacaagtgacatcacagagtatttacaaaaactg
agcaagactggtgtcccagatggaataattcagtttatcaagttgtgtactgtcagctat
gggaaggtaaagctggtactgaaacacaacaggtattttgtggaaagtacccatcctgat
gtcattcagcagcttctgcaagaccatgttattagagactgtcgcctgagaaatgcggag
ggtgaagaaacggagctcattacagagacatttacgagtaaatcagcgatttccaaatct
agtgaaggaggcttgggtccatcaacgtcacaaggaacagatgctcagaataagccagat
gtcccagctgatttatttgaattctatgaacagatggacaaagatgaggaggaggaggaa
gaaacacagacagtatcttttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggaataccccttgctggcagaatatgatttcagaaatgattcagtgaat
cctgatattaatatagatctgaaacccacagctgttctcagaccctaccaagagaaaagc
ctaaggaagatgtttggaaatgggcgagctagatctggtgttattgtcttgccgtgcggt
gctggcaagtctctagttggagtgacagctgcgtgtactgtccgcaagcggtgtctggta
cttggtaattctgcagtgtctgtggagcagtggaaagcccaattcaagatgtggtccacc
attgatgacagtcaaatatgtcggttcacttctgatgccaaagacaaacccattggctgt
tctattgctattagcacatactccatgttgggacacacaactaaaagatcctgggaagca
gagagagtaatggaatggcttaaaagtcaagagtggggccttatgattcttgatgaagta
catactatccctgcaaaaatgttcagacgtgtgctcactatagtacaagctcattgtaag
ctgggactgactgctaccctggtcagagaagatgataaaattgttgacttgaacttcctg
attggaccaaagctctatgaagcgaactggatggagctgcagaacagtggctacattgct
aaagtacagtgtgctgaggtttggtgcccaatgtcacctgaattttatagagaatatgta
gctatcaaaacaaagaagcggatactgctgtataccatgaacccaaataaattcagagcc
tgccagttcctgattaagtttcatgagcgacggaacgacaaaatcatcgtgtttgctgac
aatgtgtttgcactgaaggagtatgcaatcaggcttgggaaaccttacatatatggtcct
actgcacaaggagagagaatgcaaattctacagaacttcaagcacaatccaaaaatcaac
actatttttatttccaaggtaggtgacacatcctttgatctgccagaagccaatgttctg
attcagatttcgtcccatggtgggtctcgaagacaggaggctcaaaggctgggacgagtg
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattctcttgtt
tcccaagacactcaggaaatggcatattcaaccaagcgacaacgatttcttgtagatcaa
ggttatagcttcaaggtgataacaaagcttgcaggcatggaagaagaagaactttcattt
tcatccaaagaagaacagcagcagcttctccagaaagtcctgcaagcatccgacctagat
gctgaggaggaagtagtagctggagaatatggttcaaaatcagctcaggtgtcccgtcgt
gcgggcacaatgagctctatgtcaggagcagatgatacggtttacatggaataccactct
tcccggagtaaggcatcatcaaataaacatgtccatccattatttaaacgcttccggaaa
tga
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