KEGG   Dromaius novaehollandiae (emu): 112980772
Entry
112980772         CDS       T07572                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne04510  Focal adhesion
dne04512  ECM-receptor interaction
dne04518  Integrin signaling
dne04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dne00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112980772 (COL9A1)
   04518 Integrin signaling
    112980772 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112980772 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112980772 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dne00535]
    112980772 (COL9A1)
Proteoglycans [BR:dne00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   112980772 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2
Other DBs
NCBI-GeneID: 112980772
NCBI-ProteinID: XP_025951718
LinkDB
Position
Unknown
AA seq 919 aa
MKSNWKITAFLYVCSFLGFFVSATIQQQSRLPVILGSSQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASRGIVQRIVGSTALQVAYKLGPNVDFRIPTSALYSNGLPDEYSFLTTFRMM
GATLQKYWTIWQIQDSSGKEQVGVNLNGPTKSVEFSYKGLDGSLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKVESLNIKPKGKISMDGFAVLGKLKNNPQISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTEIERGPPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDTGKAGSPGLPGEPGADGLTGPDGSRGATGPKGQKGEPGLPGARGFPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPVGPPGLPGKRGPQGDIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGPEGDGGEKGDLGDMGLPGAKGSVGNPGEPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKGPTDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGLPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGPKGYPGPRGLPGEPGKPSYGREGRDGERGRPGVAGQPGIPGPPGPPGPPGYCE
PASCRMQAGQRVGKNMKGP
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgaaaagcaactggaaaattacagctttcctttacgtgtgtagttttctggggtttttc
gtctcagctaccatccagcaacaatcaagactgccagtcattctgggttcaagtcagaga
actgatctctgcccgaccatcaggattggccaagatgacttaccaggctttgacctgatt
tcccagttccaaatagaaaaagctgcttcccgaggaattgtccagagaatagtgggctcc
actgctctacaagtggcttataaactgggacccaatgtagacttcagaatcccaaccagt
gctttgtattccaatggattgcctgacgaatattcctttctaactacttttcgcatgatg
ggggccacacttcagaaatactggactatttggcaaattcaggattcttcaggaaaagaa
caagttggagtgaatcttaatggtccaacaaaaagtgtcgaattttcttataaaggactg
gatggaagtctccaaactgcatcatttttgcatttgcctttcttgtttgattcccaatgg
cacaagcttatgataagcgtggaagcaaacagtgtcacactttttattgactgtattaag
gtagaatccttaaacataaaaccaaaggggaaaatcagcatggatggctttgctgtgctt
ggaaaacttaaaaataatcctcaaatttcagttccgtttgaaatccagtggatggtgatt
cactgtgacccgctgcgaccccagagagaaggctgcggtgagctcccagccaggataagc
cagacagaaatcgagagaggtccccctggtccaccaggccccccaggtccaccagggcca
ccaggagttcccggtattgatggcatcgatggagagagaggtcctaacggccccccaggg
ccaccgggaccagatggggacacaggcaaagcaggatcccccggcctgcctggagagcca
ggagctgatggtctcacaggccctgatggatcacgtggagcaacaggaccaaaaggacag
aagggagagccaggactgccaggtgctcgtgggtttccaggcaaggggcttcttggacca
cctggtccagctggtgcagcaggacttcctggggaagtaggccgtgctggtccacctgga
gatccaggaaaaagaggaccaccaggaccaccaggaccaccaggtcctcggggaacaatt
ggcctgcaagatggtgacccattgtgtcccaatgcttgtccacctggtcgcccaggacat
gctggcttaatgggaatgaagggacagaaaggttcaaaaggagagtccggtgaaccagga
aaacaaggctataagggtgaagaaggagaccaaggacccattggtgaagttggagctcaa
ggccctccaggcattctaggtattagaggtataactggtataatgggacctaaaggcact
aaaggagctcgaggactcgatggtgatcctggtccccaaggtcttcctggagcacctggg
gatcaaggacagagaggcccactgggagaggcaggtccaaagggagaaaggggtcctcaa
ggtacaagaggaataaatggtctccctgggcccaaaggagagtctggcttaccaggagtt
gatggtcgggaagggatccctggaatgcctggagcaaagggtgaaccaggaaaacctggt
gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggtgtgaaa
ggcattcctggcccaaagggtaatagaggtccccctggtgtgccaggtttgatgggaaat
tctggtaaacctggtgaacaggggccagagggagaagcaggaccaacaggaccccgggga
ccaccaggtagcagaggggagccaggtcctgtgggtcctccaggtctgccagggaaacgg
ggtccccagggtgatattggacttcccggactgccaggtcctccaggtttgcctggtggt
aagggtgaccggggctcagttggtgaaccaggaccaaagggtgaacaaggtgcacctgga
ccagaaggagatggaggagaaaagggtgacttgggtgacatgggattaccaggtgcaaag
ggatctgttggtaatcctggagagcctggttcccgggggcctgaggggagtcggggactg
cctggcatggaaggaccacgaggttcacctggaccgcgaggcttgcagggtgaacaaggt
gctccaggtctgcctggcagccaaggtccagctggaaaaggaccaactgatcagcacatt
aagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttagg
aggccagaatttggtgctccaggtctcccaggcctacctggaccaccaggggctcctggg
cctcctggggaaaatggcttccctggacagcttggaccccgtggcttgcctggccttaaa
gggccccctggtgaaatcggtcgtaaaggtccaaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggaccaaaaggttaccctggaccaagaggtcttccaggtgaa
ccaggcaaacccagctacggcagggaaggccgtgacggtgaacggggccgccctggggtg
gcaggtcagcctgggattcctggtcctcctggcccccctggccctccggggtactgtgag
ccggcatcttgcagaatgcaggctggacagagagttggtaaaaacatgaaagggccatga

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