Dromaius novaehollandiae (emu): 112981074
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Entry
112981074 CDS
T07572
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112981074 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112981074 (PARN)
Enzymes [BR:
dne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112981074 (PARN)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112981074 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
Motif
Other DBs
NCBI-GeneID:
112981074
NCBI-ProteinID:
XP_025952188
Ensembl:
ENSDNVG00000017217
UniProt:
A0A8C4KI19
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEVIRSNFKDNLNKVYEAIEEADFLAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDHAEEKYVMKSFNFYIFPKPFNRSSPDVKFVCQSSSIDFLANQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGSLSYISPNATKCPVTIPEDQKKF
IDKVVEQIEDFLKNVENESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIV
ISKVDEEERKRREQQKQAKEQEELNDAVGFSRVVHAIANSGKLVIGHNMLLDVMHTIHQF
YCPLPDDLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTS
AFVSLSQPEQVQIAVNTSRYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKRLK
TQCTPYVSQSRYYCVNSFTGTSTLGKRSMSPIQEETGSDDMEEGDVQDLECDQTDSCAES
LPDGKKRAKKFKKIKKEQVPAGSLTSSSTEIFEVPETW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgatcaggagcaattttaaggataacctcaataaagtatacgaagccatcgag
gaagcggacttcctggccatcgatggggagttttcagggatcagcgatgggccttctgtt
agtgcattaaccaatggctttgacacaccagaagaaaggtatcagaaacttaagaagcat
tccatggattttttgctytttcagtttggcctttgcacttttaaatatgaccatgcagaa
gaaaagtatgtaatgaagtcatttaatttctacatttttccaaaaccctttaacagaagt
tcaccagatgtcaagtttgtctgtcagagttcaagtatagactttttagcaaaccaagga
tttgattttaataaagtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagctaagggagcagtatgatgaaaaacgttctcaggccaatggtgcaggatctctgtca
tatatttctcctaatgccacaaaatgtcctgtgacgattcctgaggatcagaaaaaattc
attgataaagtagtggaacaaatagaagacttcttaaagaatgtagaaaatgaaagtttg
gaactggaaccatgtacaggatttcagaggaaattaatttatcagaccttgagctggaaa
tatccaaaaggtatccatgttgaaactctggaatccgataagaaggagagatatattgtc
attagtaaggtagatgaagaagaacgaaaaagaagagaacaacaaaaacaagcaaaagaa
caggaagaactgaatgatgcagtaggattttccagagttgttcatgccattgctaattct
ggcaaacttgttattggacacaatatgctactggatgttatgcatactatacaccagttc
tattgtcccctacctgatgacctaagtgaattcaaagaagtgacatcatgcgtatttccc
aggctattggatactaaactgatggcaagtacacaaccttttaaggagatcattaataac
acatcccttgcggaactggaaaagcgtttaaaagaggttccattcagccctcctaaagtt
gaaagtgcagaagggtttccaagttatgatacagcttctgaacaacttcatgaagcaggt
tacgacgcttacatcactggactgtgcttcatctccatggctaattttctaggttcattt
ctcagtcctccgaaaaatcacgtgtctgctagatcaaaactcattgaacctttttttaac
aagctatttcttatgagagtaatggatataccgtatctcaatttggaaggaccagacttg
cagccaaaacgagatcatgttcttcaygttacgtttcccaaagagtggaagactagtgac
ctttatcagctttttagtgcctttggtaacattcaggtttcgtggattgatgatacgtca
gcgtttgtatcgctaagccagccagaacaagttcagatagctgtaaacaccagcaggtat
gctgaaagttataggatccagacatacgcagaatatgttgagaaaaaacatgaagaaaaa
caggcaaagagaaaatgtacagaagatagttggaaggagatggagagaaagcggttaaaa
actcaatgcacaccttatgtttcccagagtcgatactactgtgttaacagttttacaggt
accagtacattgggaaagagaagcatgagtcctattcaggaagaaactggttctgatgat
atggaagagggagacgtccaagatctagaatgtgatcaaacagactcctgtgcagagtct
cttccagatggtaagaagagagccaagaagttcaaaaagatcaagaaagaacaagttcca
gcaggaagcctcacaagtagttccactgaaatttttgaagtccctgaaacatggtag
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