Dromaius novaehollandiae (emu): 112981104
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Entry
112981104 CDS
T07572
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
112981104 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dne01001
]
112981104 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dne04054
]
112981104 (CIITA)
Enzymes [BR:
dne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112981104 (CIITA)
Protein kinases [BR:
dne01001
]
Serine/threonine kinases: Other
TAF1 family
112981104 (CIITA)
Pattern recognition receptors [BR:
dne04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112981104 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
NB-ARC
RsgA_GTPase
AAA
NPHP3_N
LRR_NXF1-5
AAA_19
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
112981104
NCBI-ProteinID:
XP_025952254
Ensembl:
ENSDNVG00000017315
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MNLFKEILPRVRNILSSATASDDHALLNLMLKEDVISKEYHQTLLHEKDREDLARKISLT
FVEKWDLYLNTLIPLCCLKLCGSKPQNITDNEPTGSKYISDSKTQIMDSAFVSENGYLDL
LHSDIDPLHLYTLFDPASSGHEESDFSADPEIDTSNYDQFSNMDFLCTMENDENGDELYL
CSNTREAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMAAENTEKFTDVKMQKCHKRT
FLGSAESCSDVSEPKYKKIGSSAHLIPEYLPVSAKGSQENTDFAAPPQQIINFLIENGTS
NVIIYPVLTSSTETLIPSSFPVSLCGLEVFKEVQVPIVPSEEPFKRPRSVEGFCTSLMDY
FRDMCKFVAMEREVTLDQLFIDGTLVQGQIETRSGKNSVKVMEKELVTCNLQGKEKAALE
RSQIFQIPGGKELETKVIVVLGKAGMGKSILVQKICQDWSNGEFSQFEFVFWFECKQISM
PEKRYSMKDLLLEFFVKPQEGSNEVFEYILQNPAKVLLVFDGFEGLHDNENFSRCSDSKP
DKEVYSIKELLSGLIQKKILNGCTLLLTARPKDKVSQYVSKVDKTVEVVGFSPQQRELFI
TKYFEGLAYCDKALKLIKDCPYLFSHCYSPVMCRFVCFLCETVLEMGDEDLPSTLTTLFL
KFVQQKLTPMQRDVTXMQNQETLATLARIAWYLGGKHQSAMKSDLLPSKEVKEFALKYGF
VLPFAFPKHSDTGEEEFGSTFSNFAIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPY
NWLDLLPRFLAGLLFLQDDMDFYFLSNKDVKQSTKKQKTLLKYIRRLQINDLCPERLLEL
FHCIYETQNNYLLQHVALRLKPELSFLGVVLTPPDVHVLYSILKRSRKEFSLDLQSSGID
MQGLKDLIGLKNVASFRASLRDTIRLWKSLEQTKEYELLRMSTEKFVLDPFKAKTVKDII
DLSDLVEMQRKIISCVZDVSGWNSYEIPAIKNLRKLEFALGQVCGLQGFLKLVGILAAFP
SLQHLDLEALSENDIGDEGAKSLSEVFPKLTSLETLNLSQNKITDVGAEKLAKALPSLSS
LKTLSLYNNSICDFGAENLAKILPAMASLRVLDVQYNKITDVGAQQLTDSLRKCPHIKNL
LMWNPTIPYGVLEHLHQLDSRISL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgccaagagtaaggaatattctctcaagtgctacagct
tctgatgatcatgcattgcttaacctcatgctgaaagaagatgtgatatccaaggagtac
catcaaaccttgctccatgaaaaagacagagaggacctcgcaaggaagatatctctgaca
tttgtggaaaaatgggacctgtatttgaacactttgattcccctctgttgtttaaaactg
tgtggcagtaagcctcaaaacatcacagataacgagccaacaggaagcaagtacatttct
gacagcaagacacaaatcatggattcagcatttgtgtctgaaaacggctatctcgatttg
ctgcacagtgatatcgatccattgcatctgtacactctctttgaccctgcatcatctgga
catgaagaaagtgacttctcagcagatcctgaaattgataccagcaactatgatcaattc
agtaacatggatttcctttgtacaatggaaaatgatgaaaatggggatgaattgtatctc
tgttccaacacaagagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatg
gctgctgaaaacactgagaaatttactgacgtgaagatgcagaaatgtcacaaacgaact
ttcttaggctctgcagagagttgctctgacgtttcagaacccaaatacaagaaaattggg
tcttcagcacatttgattccagagtatctgcctgtcagcgcgaaagggagccaagagaat
acagattttgcagctcctcctcagcagataattaactttcttattgaaaatggcacatca
aatgttataatatatccagtgctgacttcttccactgaaacactgatcccctcaagtttt
ccagttagtttatgtggcttagaagtgttcaaagaagtgcaagttcctatagttccttct
gaagaacctttcaaaagaccaaggtcagtggaaggtttttgtacatcccttatggattat
ttccgagacatgtgcaaatttgtggccatggagcgtgaagtaactcttgaccagctgttt
attgatggaactcttgttcaaggccaaattgaaaccaggagtgggaagaatagtgtaaaa
gtaatggaaaaggagctggtgacttgtaatctgcaagggaaggaaaaggcagcccttgaa
agaagccaaatatttcaaatcccaggaggtaaagaattagagactaaagtgattgtggtg
ctaggaaaagcaggaatgggaaaaagcattcttgttcagaagatctgccaggactggtcc
aatggagagttttctcagtttgaatttgtcttttggtttgagtgcaaacaaataagcatg
cctgagaagcggtacagcatgaaggatctgcttcttgagttttttgtaaaacctcaagag
ggaagcaatgaggtctttgaatacatactacaaaatcctgctaaagtccttctggttttt
gatggctttgaagggctgcatgataatgagaatttttctcgttgctcagacagcaagcct
gacaaagaggtatacagtataaaggagctactttcaggcctcatccaaaaaaagatactg
aatggttgtactttactacttacagcaagacctaaagacaaggtgagccagtatgtgtcc
aaagtggataagactgttgaagtagtaggattctcccctcagcagagagaattattcata
accaagtattttgaaggattagcctactgtgataaggcactgaaattaatcaaagattgt
ccgtacctgttcagtcattgttacagccctgttatgtgtagatttgtttgttttctctgt
gagacagtacttgaaatgggagatgaagaccttccttcaactcttactacactcttcttg
aaatttgttcagcaaaagctaacacctatgcaaagagatgttacasccatgcaaaatcaa
gagactcttgctacattagcccgtatagcctggtatcttggaggaaagcaccaaagtgcc
atgaaaagtgatcttcttccttctaaggaagttaaagaatttgctctgaagtatggattc
gtcctgccgtttgcattccccaaacattcagatactggagaagaagaatttgggagcaca
ttctccaattttgccattcagaatttcttgggtgcacttcaccttatgttagcagaagag
atcaaggataaaagcctaacaaagtacctgtcttttccatccaagaagaaaaaaccttat
aactggttagacttactgcctcgatttttggctggattgttgttcctccaggatgacatg
gacttctacttcctttcaaacaaggatgtaaaacaatcaaccaagaagcagaaaacactc
ttgaaatatattagaaggctgcagataaatgacctctgtccagagaggttactggagctt
ttccattgcatttatgaaacacaaaacaactatcttttgcagcatgtggccctaagactc
aagccagagctgtcttttctgggtgttgttcttacaccacctgatgtccacgtgctgtac
tctattttaaaacggtcaagaaaagagttttccttggatttgcaaagcagtggcattgac
atgcaagggctaaaagacttgattggactaaagaatgtggcatcattcagggcttccctc
agagatacaatcaggctctggaagtctttagaacagacaaaagagtatgaactgctgaga
atgtctacagagaaatttgttcttgatccctttaaggcaaagacggtgaaggacatcatt
gacctttctgaccttgtagagatgcagaggaagataatcagttgtgtgsaagatgtatct
ggttggaacagctatgaaattcctgccatcaaaaacctcagaaaactagaatttgcgctg
ggtcaggtgtgtggccttcagggattcctaaaacttgtgggaattcttgcagcatttcca
tcacttcagcatttagaccttgaagcrctgagtgaaaatgacataggagatgaaggagca
aagagtctatctgaagtctttccgaagctgacgtcgctggaaacattaaacttatcacag
aataagataacagatgtgggtgcagagaaactagctaaagctcttccttccttgtcttca
ttgaaaacccttagcttgtacaataatagcatttgtgattttggagcagaaaatcttgca
aaaattcttcctgcaatggcatctttaagagtgttagatgttcaatataacaaaataact
gacgttggagcccaacagctgactgacagcctaagaaaatgtccccatattaagaatttg
ctgatgtggaatcctaccattccctatggagttcttgaacaccttcatcagttggattct
agaattagtttgtag
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integrated database retrieval system
