Dromaius novaehollandiae (emu): 112981498
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Entry
112981498 CDS
T07572
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dne
Dromaius novaehollandiae (emu)
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dne03041
]
112981498 (DDX1)
03016 Transfer RNA biogenesis [BR:
dne03016
]
112981498 (DDX1)
Enzymes [BR:
dne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112981498 (DDX1)
Spliceosome [BR:
dne03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112981498 (DDX1)
Transfer RNA biogenesis [BR:
dne03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
112981498 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
112981498
NCBI-ProteinID:
XP_025952957
Ensembl:
ENSDNVG00000010869
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDKGQIKFSKNGKDLGLAFEIPQHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIALCKAPDGNVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVLVNPKVDKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAEXGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGE
IEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKE
AQTSFLHLGYLPNQLFRTF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgccagagatagctcaagcagtggaggagatg
gactggcttctccccacagatattcaagcagagtctatcccactgattctaggaggcggt
gatgtgcttatggctgcagaaacggggagtggaaaaactggtgcttttagcattccagtt
atccagatagtttatgaaacattaaaggaccagatggaaggcaagaaagggaaagcaacc
attaaaactggtggggcagtgctcaataaatggcaaatgaacccatatgatagaggatca
gcttttgcaattggatcagacggtctatgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcaactagaggcgtgactaaaggaaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggctggtcaactatgcaggcttcattagacttgggcact
gataaatttggctttggctttggagggactggcaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaattggatgttatctagacctagataaa
ggacaaataaaattttccaaaaatgggaaagaccttggccttgcatttgaaatcccacaa
cacatacggaaccaagcactctttgctgcttgtgtactgaagaatgctgaattgaagttc
aattttggtgaagaagacttcaagtttccaccaaaagacggctatattgccctttgcaaa
gctcctgatggtaatgttgtaaaatcacaacatacaggaaatgcacaagtggttcaracg
cagaacctaccaaatgctccaaaagcattgattgtagaaccatcaagagagctggcagaa
caaactttaaacaatgtgaagcagttcaaaaaatatgttgataatcccaagttaagggag
ctgctgattattggtggtgttgccgcaagagatcaactctctgtgctggaacaaggagtg
gacatagttgtgggaacccctggaagactggatgacctggtctcaacaggaaagcttaac
ctatctcaagttagattcctggttctggatgaagctgatggccttcttctgcaaggttat
tcagacttyataaacaggatccacagtcagattcctcagataacttcagacggaaagaga
cttcaggtgattgtgtgctctgcaacattgcattcttttgatgtgaaaaaactatctgaa
aagattatgcattttcccacctgggttgacttgaaaggagaagattctgtccctgaaact
gtgcaccatgtagttgtgcttgtaaatccaaaagttgacaaactctgggaaaggcttggc
aagaatcacataagaactgatgaagtacatgcaaaagataatacacgacctggtgctaac
actccagaaatgtggtctgaagctattaaaattctgaaaggagagtacactgttcgggca
atcaaagaacacaagatggaccaagccattattttctgtaggactaaaatagattgtgat
aatatggagcaatacttcatccarcagggcggaggccctgataggaaggggcatcagttc
tcttgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacttggaaaga
tttaagagaggagatgtccgtttcttgatctgcacggatgttgctgctagaggaatcgat
attcatggtgttccrtatgttatcaatgtcacactccctgatgaaaaacagaactatgtt
catcgaattgggagagtaggcagagctgaaagnggtctggcaatctcccttgtggcaaaa
gaaaaagaaaaggtgtggtatcatgtatgcagtagccgtggaaaaggatgttataatact
agactgaaggaagaaggaggctgyaccatttggtacaatgagatgcagttgctgggcgag
attgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtaccagtg
gatgactttgatgggaaggttacttatgggcaaaaaagagctctgggtggtggactctat
aaaggccacgtggatatcttggcacctacggtacaagagttggctgcccttgaaaaggaa
gctcagacttctttcttgcatcttggctaccttcctaaccagctgttcagaacattctga
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