Dromaius novaehollandiae (emu): 112981890
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Entry
112981890 CDS
T07572
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
dne
Dromaius novaehollandiae (emu)
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112981890 (FOCAD)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112981890 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
DUF2247
MOM1
Motif
Other DBs
NCBI-GeneID:
112981890
NCBI-ProteinID:
XP_025953668
Ensembl:
ENSDNVG00000004279
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MSDDIKKRFEFPNTLIQSQAVAHLIAAVLKENVSSDKIRQASDQTPALNLLWEKCCSENV
ALRTACSEGLVALVAEKHADLSYVLHGALNLIPSARNVHGLIKTIWKLLQMQALQLGKDG
DEAVWNLYAIRNTPHPLISVLENRPDCWPVLLQQITAFFQQCPDRAQSSCVGIMAPFLRY
LYCEPSQLREYAELRMGLLKILLKPRGPKNKEAPSMLESQIIILLCDLVPHLQLKDLAQV
TEALFFLQELFLSLLCYPVFWKVQLSQFCLQLLCFCEVCLNVTGECSSVISLIEDHFELL
KEVFPTEQYIVGLALLLLQIPASQQKSVLSLAYKLLSCSETQNIPTTALVLVMPVLQILS
STAVGDCLSEEBSGTTRQQLAINLLEMLQQEGVKDKKELMSSKLLFPITSTYSSLYTTWK
IIELMKEKSAIAAWLFSVKSLLPITTQVPSHVFLLLAYLLVQENGDSLRGVLSAITEVAK
ADCSQVPNLIPVLLFKLGRPLEPALYRDILYTLPALGVHKVCVAQILRAIQMLGSTPKLR
AITLRLMTSLWERQDRIYPELQKFMAVSDMRSLSLDKDAQWEKLIAKAACIRDICRQRPY
QHGADMLAAISQVLNECTKPDQASPAAIVLQGLQALCEAEVVCIRSTWNALSPKLSCDTR
PLILKTLNELFALVPSLTVNTNEYEKFKAQVISFLWNNTQNKDAVVAVSAYKSLSSFGSE
EHTVLHLPEQARPEVDPLEETDMNEEEEEKEVDLSVPGSSYIKLLSLTPAPVLGAFEEFA
TSLVKQEMANMPRGVYHSALRGGTARSDQGKSVAGVPNFLLKMYERNKQPGMTPGLAAGM
LLCYDLPVHMGKDGKPINRFLASRGRNFQQMLIALIHEVNIQPSEWHRSILLPQSWLGFM
SRTYSAVLQGRQAELEMQLKHGKEDPEEVQYKQFTAWLWVRDMLTDVIKGASKDSPVVKG
NSLLALTGLAVAVAKYESSLSSDTEGMPETEPDFLPTKHWISMVIETLFSIVNSRYHPKG
RVFPWXYQKSYSGENTASAIARSCAATALSLLVPVFIVSCKEKVEEVLSMLTARLPGKPN
ADESQAVQIHMGLALGMFISRLCEEKVSDVPGQQMNLLLMKSLDALEGCCFDTSLEYNTG
CILGVGLVLSLMSHSSQTESRVHVSASLQKLCNYLDGSEDQSRWVQEVLAYSVACSCVSA
FSVGIIEAAEAEEAMNKLRTLVENNQQTSGFALALGTIVHGLSACGHGKAEDLSNRLMPA
WIKIVLAEGSPTMQRLAAVNGLVALVGSEGGMIQLKCESIQSSQFQSKLNEVIRTLTQII
SFSGQIGLQTNAAGLLGHLHMSCLSSAQSRASVPPDFSYLPENSFIRAAIDFAIEGGKRG
PESVPAQLVKVVLVPIALVGESHQYPPVNWASILSPLMRLNFGDEIKHLCVELAVTQAQS
SQNAAMLLGMWVAPPLVYSLSMKTQKYLFVSLPLWMKHIAEDKLQSFTEVFLMQPFKVKN
PTKRTEICQCVLQGLGQAMKLPNPAQYCWSFLCQAAEKIFELLPNEIKRDEVELYIDVAK
CISEMADSEIDRIVQISKNNIEKATFIKVYLISQGRLPLMNLSALIDTVAGYHQKGSIAW
MLLHGFYHARIVSHENTGVMKRMDWLLDLMGYIRNVAYKSTPIQNVDLKEAIDFLLWLFA
ASVVAWADHGAPLLLGLSANWSPWKHQNILPELSEDHFGKHPTDKFAVQETLTLLPSSIT
LLLAKEPWKEQTQKIIDWLISMVESPKEVLSKSSKDLLKVTLLALRSLTEFKKKAVWTKA
YGW
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgatatcaagaaacgatttgaatttcctaacacacttattcagtcacaggca
gtggctcatctgattgctgcagtactgaaagaaaatgtttcttcagacaagataagacaa
gcctccgaccagactccggctctgaacttgctctgggaaaagtgctgcagtgagaatgtg
gccctgcgaacagcctgctctgaaggattggtggcacttgttgcagagaaacatgctgat
ctcagctatgttcttcatggagctctcaacctaattccctcggccaggaatgtgcatggt
ttgataaaaactatttggaaattactacaaatgcaagcccttcagctgggaaaagatgga
gatgaggctgtttggaatttgtatgcaatcaggaacactcctcatccattaatcagtgtg
cttgaaaacagacctgattgctggccagttctcctgcagcagataacagcatttttccag
cagtgtccagacagggcacagagttcatgtgttggtataatggctccatttctaagatac
ctgtattgtgaaccatctcagttacgtgaatatgcggagctgagaatgggcctactgaag
atcttgcttaagccacgtggtccaaagaacaaagaagcaccctctatgctggaatcccag
attattatacttctgtgtgatttggttccccaccttcagcttaaggacttggcrcaagtt
acagaagccttgttttttctgcaagagctattcctaagcctactgtgctatcctgtgttt
tggaaagtccagttatcccagttttgtctgcaattgttatgcttctgtgaagtgtgttta
aatgtaacgggagaatgttcatctgtgatctccttaatagaggaccactttgagctctta
aaagaggtttttccaacggaacagtacatagttggtttagcactactactgcttcaaata
ccagcaagtcagcagaagtctgtcttgagtctagcctacaagctcctttcctgttcagaa
acccagaacatcccaaccacagcccttgttttggtgatgcctgtgttacagatcttatct
tctacagcagttggggactgcctatcagaggaarattctggcactaccaggcagcagttg
gctataaatcttttggaaatgttacagcaggaaggtgtgaaggataaaaaggaattgatg
tccagcaagctcctcttccccataaccagtacttacagttcattgtataccacctggaag
atcatagagctcatgaaagagaagtcagcaattgctgcctggttgttttcggtgaaatca
ctgctacctattacaactcaagtccctagtcatgtttttcttctgctggcttatctcctg
gtccaggaaaatggagacagtcttcgtggtgtactcagtgccattacagaagtagccaag
gctgattgttctcaggttccaaatctgatcccagttctgttgtttaaactgggaagaccc
ctggagcctgcattgtacagggatatattgtacacactacctgcactgggtgtacacaag
gtctgtgtagctcagattctacgtgcgatacagatgctggggagcacaccaaagcttaga
gctattacactgcgcctgatgacatccttatgggaaagacaggatcgaatttacccagaa
ttgcagaaattcatggcagtatctgatatgcgctctttgtctcttgacaaagatgctcag
tgggaaaagctgattgctaaagctgcctgcataagagatatatgtaggcagaggccgtac
caacatggagcagatatgttggctgcaatttcccaagtattaaatgaatgcacaaaacct
gatcaagcttcccctgcagccatagtgttacaaggtcttcaggcactttgtgaggctgag
gttgtttgtattcgctctacgtggaatgctctgtctccaaagctgagctgtgatacaaga
cccctcattttaaaaacacttaatgaactgtttgccctggttccctcattaacagtgaat
acaaatgaatatgagaaattcaaagctcaagttatcagcttcctttggaacaacacacaa
aacaaggatgctgttgtagcagtttcagcctataaatcactctcttcatttggctctgaa
gaacatacagttcttcaccttcctgaacaggcacgaccagaagttgatccactagaggag
acagacatgaatgaagaagaagaagagaaggaagtagatctctctgttccaggctcttcc
tatatcaagctgttgtctctgacaccagctcctgttttaggagcatttgaagagtttgca
acatcacttgtgaaacaggagatggccaacatgccccgtggtgtgtatcattctgctttg
agaggagggaccgcacgctcagaccagggcaagagtgtggcaggtgttccaaacttcttg
ctgaaaatgtatgaaaggaacaaacaaccaggcatgacaccaggccttgcggctggcatg
ttgttatgttacgaccttccagtccatatgggcaaagatggcaagcctattaatcgtttt
ctggccagcagaggacgcaatttccagcaaatgttgatagccctcattcatgaggttaac
attcagccttctgaatggcaccgctctatattgctgccgcagtcctggttgggatttatg
agtcgaacatacagtgcagtcttgcaggggagacaggcagagctagagatgcagttaaaa
catggaaaggaagatcctgaagaggtgcagtacaaacaatttacagcctggctctgggtc
agagatatgttgactgatgtcatcaaaggtgcttcaaaggacagcccagtggtgaaagga
aactccctcttagccttaactggtcttgcggttgcagtagccaaatatgaaagcagcctt
tcctcagacactgaagggatgcctgagactgaacctgattttcttcccacaaaacactgg
atttctatggtcatagagaccctctttagtattgtgaatagccgctatcaccctaaaggt
cgagtcttcccatggttmtaccagaaatcctattctggtgaaaatacagccagtgctata
gctcgttcctgcgcagccactgctttgtccctcctggtgccagttttcatcgtgtcttgc
aaggagaaggttgaggaagtcctgagtatgctgactgccaggttacctgggaaaccaaat
gctgatgagtctcaagctgttcaaatccatatgggcctcgctttgggaatgtttatctca
cgtttgtgtgaagaaaaagtcagtgatgtacctggtcagcagatgaacttacttctaatg
aagtccctagatgcactggaaggctgctgcttcgacaccagtctggagtacaacactgga
tgtattttgggagtgggacttgttctttcactcatgagtcacagcagccaaacagaatca
cgagtacatgtttctgcttcactgcaaaaactttgtaactacctggatggcagcgaggac
caaagcagatgggtccaggaggtccttgcctattctgtagcctgttcctgtgtatctgct
ttcagtgttggaatcatagaagcagcagaggctgaggaggccatgaacaagctgcgaacc
ttggtggaaaataatcagcagacatccggttttgctttagctctaggtacgattgttcat
ggtttgtcagcttgtggtcatgggaaagctgaagacctgagtaacaggctgatgccagcc
tggattaaaattgtacttgcagagggttctccaacaatgcagcgtctggctgctgtcaat
gggctagttgcactggtgggttctgaaggagggatgatacagctgaaatgtgaaagcatt
cagtcttcccagtttcaaagtaaactcaatgaagtcatcagaaccctcacccagataatc
agtttttcgggacagattggccttcagacaaatgcagcagggcttttgggacaccttcac
atgtcctgtttgtcttctgcccagagcagggcatctgttcctccagattttagctacttg
cctgaaaacagctttatcagggcagctattgactttgccattgaaggtggaaagagaggc
ccagaatctgtcccagctcagctggtgaaagtagtgctggtacccattgcgttagttgga
gaaagtcaccagtatccacctgtgaactgggcatccattctttcacctttgatgagacta
aactttggtgatgagataaaacatctctgcgttgaacttgctgtgactcaggctcagtca
tctcaaaatgctgcaatgcttttggggatgtgggtggcacctccccttgtctacagtctc
agtatgaaaacccagaaatacctttttgtgtctctgcccctgtggatgaaacatattgca
gaagacaagctacagtcttttacggaagtgtttctgatgcaaccatttaaagtgaagaat
cccaccaaaagaacagaaatttgccagtgtgttttacagggtcttggccaggcaatgaaa
cttccaaaccctgcccagtactgctggagctttctgtgccaggctgctgagaaaatattt
gagcttttaccaaatgaaattaagagggatgaagtggagctgtatattgatgtagcaaaa
tgtatctcagaaatggcagattcagagattgatcgaattgtccagatctctaagaacaat
atagagaaggccaccttcatcaaagtgtatttaatttctcaaggcagactgcctctgatg
aacttgagtgccttgattgatactgtggcaggatatcatcaaaaaggatctattgcatgg
atgctcttacatggtttctatcacgctcgaattgtgagccatgaaaacacaggagtgatg
aagagaatggactggctgctggatctgatgggctatatcagaaatgttgcgtacaaatca
acacctatacaaaatgtagatcttaaagaggccatagacttcctactgtggctgtttgca
gcttctgtggttgcctgggctgaccatggtgcaccactgttgcttggcctcagtgccaac
tggtcaccgtggaagcaccaaaacatattaccagaattgtctgaggatcactttggcaaa
caccccactgacaagtttgctgtgcaagagactctaactctccttccaagcagcattacc
ctcttgctagctaaagagccttggaaagaacagacacagaagattattgactggcttatc
agtatggtggaaagtcctaaggaagtgttatcaaaatcttccaaggacctgctgaaagtt
acacttcttgccttgaggtctctcacagagttcaagaagaaggcagtgtggactaaagct
tatgggtggtag
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integrated database retrieval system