KEGG   Dromaius novaehollandiae (emu): 112982068
Entry
112982068         CDS       T07572                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne03082  ATP-dependent chromatin remodeling
dne03083  Polycomb repressive complex
dne04110  Cell cycle
dne04330  Notch signaling pathway
dne04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dne00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112982068 (HDAC1)
   03083 Polycomb repressive complex
    112982068 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    112982068 (HDAC1)
   04350 TGF-beta signaling pathway
    112982068 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112982068 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dne03036]
    112982068 (HDAC1)
Enzymes [BR:dne01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112982068 (HDAC1)
Chromosome and associated proteins [BR:dne03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     112982068 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     112982068 (HDAC1)
    BRAF-HDAC complex
     112982068 (HDAC1)
    REST complex
     112982068 (HDAC1)
    SHIP complex
     112982068 (HDAC1)
    MiDAC complex
     112982068 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     112982068 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112982068 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    112982068 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112982068
NCBI-ProteinID: XP_025953951
Ensembl: ENSDNVG00000010243
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKSA
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaccccacaggatccggatgacccacaacttactgctgaactatggcctctacagg
aagatggagatatatcgtcctcacaaggcaaacgcagaagaaatgaccaagtaccacagt
gatgactacataaaatttctgagatctattcgccctgataacatgtctgagtacagcaag
cagatgcaaagattcaatgttggggaagactgccctgtatttgatgggttgtttgaattt
tgtcagctctctgctggaggctcagttgccagtgctgtgaagctgaacaagcaacagaca
gatattgccgtgaattgggcaggaggccttcaccatgctaagaagtcggaggcttctggc
ttctgttatgtcaacgacattgtcttagctatcttggagctcctaaagtatcatcagaga
gtgctgtatattgacattgatattcaccatggagatggcgtggaggaagccttttacacc
acggaccgtgtcatgactgtgtcctttcataagtatggagaatacttcccaggaacaggg
gacctgagggatattggtgcaggcaaaggcaagtattatgctgtcaactatccgctccgg
gacggaattgatgatgagtcgtatgaggcaatattcaagccggtgatatctaaagtgatg
gagacgttccagcctagtgcagttgtcttgcagtgcggatcggattctctgtcaggggac
aggctgggttgttttaatctgaccatcaaaggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctatacaatccgcaacgtggct
agatgctggacctatgagaccgctgtggctttggacactgaaattccgaacgaacttcca
tataatgactattttgagtactttgggccggactttaaactccacatcagtccctcaaac
atgaccaaccagaatacaaatgagtatcttgaaaagatcaagcaacgtctctttgagaat
ttgcgcatgctgcctcatgcccctggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagaccctgagaaacgcatttcaatccgcaat
tctgataagagaatatcctgtgatgaagaattctctgactctgaagatgaaggggaagga
ggccgcaaaaatgttgccaactttaagaaagctaagcgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagaggagaaagcagaa
cccaaaggggtgaaggaagagactaaatctgcttga

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