Dromaius novaehollandiae (emu): 112983242
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Entry
112983242 CDS
T07572
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dne
Dromaius novaehollandiae (emu)
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dne04131
]
112983242 (VPS13A)
Membrane trafficking [BR:
dne04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112983242 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
112983242
NCBI-ProteinID:
XP_025956007
Ensembl:
ENSDNVG00000011562
LinkDB
All DBs
Position
Unknown
AA seq
2982 aa
AA seq
DB search
MAILCNVRVPFTPKTGRTTARRPQIQTSRSLTHTTTDLLNFSFTCCFLDFLGAVALKNLE
IKENALSQLDVPFKVKAGHISQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEK
EARQLLEARQRELQRIEEAKQKIADQDKVKEEKQDSFVEKLVTQVIRNLQVKISNIHVRY
EDDITNRNNPLSFGISLQNLSLQTSDKNWNPCLHDETAKLFYKLVRLDNLFAYWNVKSEM
FYHGGYDESLVNLKQGVASHSVIPAGYDFVFRPISAKAKLLMNPRSDVDFSTPKMGLDVN
LQDITVEFNKPQEFEKALDVFNITLARQQAEVEATKAGLKIYRPGVKQDDENSGGWFSWI
WGWSGEKKDEEKQEVKGSSLEELMTLEEKAKLYAAIGYSETAVDPTLPKSVSRLLYVIET
QKVLDLKINLMASYIIVPQKGFYDCTSNLLLLDLGSLKMKSKSRSDLSELKVGQSTIEDI
MSRAYDSFDIQLSSIQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARM
PKFKMSGQLPLLSIQISDQKLTSILELIDSIPKPESTPATGSPPKISEAAISPVLSAPYL
PQSALPVLDFHSFAESESEEEFYDALSSPVEDMPFFEASCGSLKRANSTRRQKLRKQESM
KNMTDFQLRFEVAEVLIKLCRLTDNIETPVLQLEVVGLGTELNLRTFDMTANAFLREVCL
LCPEYMDDNDKPVYIVTTLDNVEDDLLTLEYIKADINGPELKTAYQNVLQKIKVNFSSLD
VHLHTETLLNAMNYLNSLLPKQETKVAEEPVQEKVEEKKDVLKKLTSKKSKYEDVIDLNI
CADLSCLRVFIREKKHRISEIHIEGLDSQVIMKKASTEVNAKLKNIIIVDSDEMALYKKA
LYITGKEVFNFRMISYVNATDGIAYTNMDVVDSRIYLTVGCIQVVFVNKFVSSVLAFINN
FQAAKEAVTEATVQAAEKAATGVKELAERSSRLSLDINIKAPVVIVPQSAMSANVLVADL
GLITVKNQFIIAKTKTRYTLPPVIDSMTVKLSELKLYRSYYESGSLQSEVQLLQPLNLEV
SVERNLAAAWYSDVPDIEISGRLKPMNLILSQEDITTILRTLNENIGGGSGAPPPSPEPK
DTNSRCSDARSTSQHSAGVTVVTSAVVELHSPVKIKTTLKLDFRFDSLTLVLYSPNSKQA
AVMDQRDDLLKLAEFKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEM
KHGFEKKFMVDISYKQGRDGTVLDVIVQEIYLCASMEFLLTVADVFLKANAESAAAQRSL
KQSLPLKEQAPLQPVSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERY
SMTAAVREIQMKACPFLPEKRKGNSITVLQPCDFFFEMKQLGTNPQFADLTIKSLAIKVS
PIIINTVITITSALSPTTETXEKEISQIPPDLWNKKDIKNLKMWFLEESNEKEDINPTAE
LVPTGETLKMNIESVIITLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSRLELEVHY
FNEMFGVWEPLLEPLEIEKTDLFKPWILEIKMKKKAKKALVESDAEEENYKVPEYKTVIH
VSSKDQLNITLSKCGLLMLSNLGTAFAEAASQTSDIFKKDRAPFVIINSLGLPITVSPSD
SFSVINVEFGAKIFHLEDGENLNMEYVRTKNERDQFTAMTTLSSKRFYIQICPHNHSVVE
KIPLTKVGRCLYTVRHEGSGVERSIVCQIDTVEGSKMITIRSPIQIRNHFSIPLNIFEEG
RCLGTALPENEFSIPLSSYRSRLSLQPLASENGVDGEYDMCEGITFDEIMKNVDSLLQRK
CQSVKSTNYSLVINIVPVKDTLTSSLCADDQWDFPYVVHLWPSVLLRNLLPYQITYSVEG
NGNKHDTLEDGCSAQIHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPDISFTTFYCIT
ELDKTELDIAVHVTYTTGQMVIAIHSPYWMVNKTGRMLQYKADGIHRKHPLDYKKPLLFS
FQPKNFLQNNKVQLMVTDSELSDEFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSCNITR
IVTFTPFFMISNRSKYTLEVSEEGKEKWIPIVLQQWCEKQWERELSGMCIPFWPESDGNK
LLVRVENSDLPPRKINFDKQENSLLLHLDNKLGGIIVDVNLTEHSTVITFSDYHDGAAPF
LLINHTKEEILEYGQSSLCELEDCLQPNKAVLYTWADPTGSRKLKWKCGKRTEEITPKED
RMEILGLDSRKMVYLVSFFEGLQRIVLITEDQNVFKLTYESVKAELAEQEIVLSLQDVGI
SLVNNYTKQEVSFIGITSSDVVWETKPKKKSRWRPMSVKQTDKLEQEFKDYSELTPSENK
IIELESNVLVCLTPNGSNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSFRIQVYRIQIQ
NQIPGAIFPFVFYPIKPPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDL
RIDLGFLYALVEFFTQTDVPSDQELELFKKDVESLQEELMSVSSMDTSQISLYEYFHISP
IKLHLSFSLSTGGEDSNKEERKNELIPLQSLNLLLKSIGATLTDVQDVVFKLAFFELNYH
FCTTQQLQSAVIRHYSKQAIKQMYVLILGLDVLGNPFGFIRGLSEGVEAFFYEPYQGAIQ
GPEEFIEGMALGLKALVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNRQP
TGLREGITRGGKGLVSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGI
IDMASSTFQGIKKVTDSSEDVISLRPPRFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAK
FRYIAHAMVNSTDLLMVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEA
KERVKSVFHAKEFGKIINFKTPEDAKWILSKLEEVRENQPKL
NT seq
8949 nt
NT seq
+upstream
nt +downstream
nt
atggctattttgtgtaatgtgcgggtacctttcaccccaaagactgggagaaccaccgct
cgaagaccacagattcagacttcaagaagtttaacacacaccactactgacttgctgaat
tttagttttacctgttgttttcttgactttttaggagctgtagcactgaagaatcttgaa
ataaaagaaaatgcactgagtcagctggacgtgccatttaaagttaaagcaggacatatt
agtcaacttaacctacagattccatggcaaaacctttatactcaacctgttgaggcagtt
cttgatggagtttatttgcttatcgtgcccacagccagcataaaatatgatgcagagaaa
gaagccagacaactcttggaagcaaggcaaagagaactgcaaaggatagaggaagcaaag
cagaaaatagctgaccaagataaagtaaaagaagagaaacaagacagttttgttgaaaaa
ttagtcactcaggtcatcagaaatcttcaggtgaaaatttccaacatccatgttcgctat
gaagatgatatcacaaatcggaataaccccttgtcatttgggatttcacttcagaatctg
agtttgcagacctcagataagaactggaatccatgtttacatgatgaaactgccaagttg
ttctataagcttgtacgactggataacctttttgcgtattggaatgtgaaatctgagatg
ttctatcatggtggttatgatgaatctttggttaacttaaaacagggagttgccagccac
agtgtgattccagcgggttatgattttgtattccgcccaatttcagctaaagccaagctc
cttatgaatcctcgatcagacgttgacttttctacaccgaaaatgggtttagatgtaaat
ttacaggatataactgttgaattcaataagccacaggaatttgaaaaggccttggatgtt
ttcaacatcacactagcaaggcaacaagcagaagttgaggcaactaaggctggattaaaa
atttacagaccaggagtgaaacaagatgatgagaattctggtggctggtttagctggata
tggggctggtcaggtgaaaaaaaggacgaagagaaacaagaagtaaagggttcaagtctt
gaagagctaatgacacttgaagagaaggctaaactttatgctgcaattggatatagtgaa
acagctgtggatccaacacttccaaaatcagtaagtcgtttgttgtatgttatcgaaacc
cagaaagttcttgacctcaaaattaacctcatggcttcatatatcattgttccacaaaaa
ggattctatgattgtacatcaaacttactgcttttggatcttggtagtcttaagatgaaa
agtaaaagtcgttctgatttatcagaacttaaagtaggacaaagcactattgaagatata
atgtcaagagcttatgacagttttgatatacaactcagcagcatacagttactctacagc
aaacatgatgaaaactggcaagaggctcgtaaactgaaatactcatctcaacatatcttg
cagcccttggatgtaaaagtggaatttagcagggctatggttgtcacagatgcaagaatg
cccaagttcaaaatgtctggacagctgcctttactttctatccaaatatcagaccaaaag
ttgacaagtatcttggaactaattgacagcattccraaaccagaaagtactcctgctaca
ggttctccccccaaaatatctgaggctgcaatatcccctgtgctgtcagcaccatactta
ccacaaagtgcacttcctgttttggattttcattcatttgctgagtcagaatcagaagaa
gaattttatgatgctctaagcagccctgtggaagacatgccattttttgaagcctcatgt
ggttccctcaagcgagctaacagtacaagacgacaaaaattacgtaaacaagaatctatg
aagaatatgacagatttccagctaagatttgaagtagctgaggtcttaattaaattgtgt
cgtcttactgataatattgagacacctgtgctgcagcttgaagttgtagggttaggcact
gaactcaatttaagaacatttgacatgactgcaaatgctttccttcgtgaagtctgccta
ctgtgcccagaatatatggatgataatgacaaaccagtttatatcgttactactttggat
aatgtagaggatgatcttctcactctggaatacataaaggctgatattaatggaccagag
ctgaaaactgcctatcagaatgttctacagaaaataaaggtgaatttttcttctcttgat
gttcatttgcatactgaaactctcctaaatgccatgaattatctgaacagtctcctacca
aaacaagaaactaaagttgcagaagaaccagtccaggaaaaagtagaggagaagaaggat
gttcttaagaaattaacatccaaaaaatcgaagtatgaagatgttattgacctcaatatc
tgtgcagatttatcctgtctacgtgtttttattagagagaaaaagcatagaatatctgaa
attcacattgaaggtctggatagccaggtgatcatgaaaaaagcatcaacagaagtgaat
gcaaaattaaagaacatcattattgtggattctgatgagatggcgttgtataagaaggct
ctttacatcacaggaaaagaagtcttcaactttaggatgatatcttatgtgaatgctaca
gatggtattgcatatacaaatatggatgttgttgacagtcgtatttacctaactgttggc
tgcattcaagtagtttttgtcaacaagtttgtttcctctgttttggcttttataaataac
tttcaagctgccaaagaagcagttactgaggcaactgttcaagcagcagagaaagcagct
acaggtgtaaaagaactggcagagcgtagttcccgattgtcactagatatcaatattaaa
gcaccagttgtgatagttccacagtcagcaatgtctgcgaatgtcctggtggctgatctt
ggtctaatcactgtaaagaaccaattcattattgctaaaacaaaaacacgatatactctc
ccgcctgttattgactctatgacagtgaaattgagtgaactaaagttatacagatcgtac
tatgagagtggttcactgcaaagtgaagtacagctgctgcagccactaaatctggaagtt
agtgttgaacgaaatttagcagctgcatggtatagtgacgttcccgatattgaaatatct
ggacgactcaagcctatgaatctgatcctcagtcaggaagacataaccacaatattgagg
acactaaatgaaaatataggcggaggctctggtgcaccaccaccttcaccagaaccaaaa
gatacaaatagccgttgtagtgatgcacgcagtacttcacagcactctgcaggtgtgacc
gttgtgacatcagctgtggtggaattgcattcacctgttaaaattaaaacaacgctaaaa
ctggatttcagatttgactctctgactttggtactgtatagtccaaattcaaaacaggct
gcggttatggatcaaagagatgatcttttgaagcttgcagaatttaaattagttttgatg
tcagctgctgtcaaaatgttatcagatggttcaatgaatgcttcagtcaagttagcaaac
tgtacattagatgataaaagacagtcaatccagaaggctacaccgaggatggtggaaatg
aaacatggatttgaaaagaaatttatggtggatataagctataagcaggggagagatggc
actgttcttgacgtgattgttcaagagatatacctgtgtgcaagcatggaatttctactt
actgttgcagatgtattcctaaaggctaatgcagaaagtgctgctgcacagagaagtctc
aaacaatctttacctttaaaggaacaagcacctttgcagcctgtctctacaatggaaatg
aatattgttgttaaaaatccagagattgtgtttgtggccgatttaacaagaagcgatgct
cccgcgttggtggttacaactcagtgtgaggtcttcattaaaaatagccctgaaaggtat
agcatgacagctgctgttagagagatacaaatgaaagcctgcccttttctcccagaaaaa
agaaaagggaacagtattacggtattacagccttgtgacttcttcttcgaaatgaagcag
ttgggtactaacccgcagtttgckgatctaacgattaaatctctagcaataaaagtttca
ccgataataataaatacagtgattaccattacatcagccctttctccaactacagaaacg
kcagagaaggagatcagtcaaattcctccagatttgtggaataagaaagatataaaaaat
ctaaaaatgtggtttcttgaagaatcaaatgaaaaggaagatataaatccaaccgctgaa
ttggttcccacaggagagacattgaaaatgaatattgaatcggtcattataacacttgaa
gctggggttggtcaccgaactgtaccaatgctcttagcaaagtcatcgtttcttggagaa
gtgaaaaactggagtactcttatcaacctacgttctcggcttgagctagaggttcactat
tttaatgagatgtttggggtgtgggaacctttacttgaaccactagaaattgagaagact
gatttattcaaaccatggattcttgaaatcaagatgaaaaagaaggctaaaaaagcatta
gttgaatcagatgcggaagaggagaactacaaagtcccagaatataaaacagtaatacat
gtttcctcaaaagaccagctgaatattacactatccaaatgtggactactaatgttgagt
aacttaggcacggcatttgctgaagcagcgagccaaacttcagacatcttcaaaaaagac
cgagcaccttttgtaataataaattctttaggacttcctatcactgtctcacctagtgat
tcctttagtgtcattaacgttgaatttggagcaaaaatatttcatttagaagatggagaa
aatttaaatatggaatacgtcagaactaaaaacgagagagaccagttcacagcaatgaca
actctgagtagcaaaaggttttacattcaaatctgtccacataatcattctgtggtggaa
aagattccattgacaaaagtgggccgatgtctttacactgtaagacatgagggatcaggt
gttgaaagatccattgtctgccaaattgatactgtcgaagggagcaagatgataactata
cgttctccaatccagataaggaatcacttttcaattccattaaatatttttgaggaagga
agatgtttaggaactgctttaccagaaaatgaattcagcatacccctgtcctcttacaga
tccagactgagtttgcaacccctagccagtgaaaatggagtggatggagaatatgatatg
tgtgaaggaattacatttgatgaaatcatgaaaaatgttgacagcttattgcagaggaaa
tgccagtcggtgaagtcaactaactactcacttgtcatcaatattgtcccrgtaaaggac
acattgacatcttcgttatgtgcggatgaccagtgggattttccatatgttgtacattta
tggccttctgttcttctccgcaaccttcttccatatcaaataacttactctgtcgagggg
aatgggaacaaacatgacactttagaagatggatgctcagcccagattcacaatgcagtc
ttggatcaaacaaagctagatttacagttgcttaattatcttgatcaaaattggaaaagt
gagtaccatataaaaagtaatctaccagatatcagcttcacaacattttactgcatcact
gagttggataagactgaactggatattgctgtccacgtgacctacacaactgggcagatg
gtcatagcaattcacagtccatattggatggtaaataaaactggtcgaatgttgcaatac
aaagctgatggtattcaccgcaagcatcctctggattacaaaaagccgctgcttttttct
ttccagcccaaaaacttcctccaaaacaacaaggtgcaacttatggtaactgacagtgaa
ctgtctgatgaattttcactggatactgttggaagtcatggttctgtgaaatgcaagagt
cataaaaaggagtatcaagttggagtcaccataaacaacagcagttgtaatattactaga
attgtaactttcactccattttttatgatctcgaatagaagcaaatacactttggaagtg
tctgaagaaggcaaggagaagtggattcctattgttttgcaacagtggtgtgagaaacaa
tgggagagggaacttagtggcatgtgcattcctttttggcctgaaagtgatggcaacaaa
ctacttgttagagttgaaaattctgatcttcccccaaggaagataaattttgataagcaa
gaaaactctctcttactgcatctggacaacaagcttggaggaattatagtggatgttaac
ctgactgagcattctacagtgattaccttttctgattaccatgatggcgcagctccattt
ctgctaattaaccatactaaagaagaaattcttgaatatggacagagttccctctgtgag
ttggaagactgtcttcagccaaataaggctgtgttgtatacttgggctgacccgacagga
tctagaaaattgaaatggaaatgtggaaagagaactgaggaaattaccccaaaggaagac
agaatggaaatactcggcttggacagtagaaagatggtctatttagtgtcattttttgaa
ggtttacagcgtattgtcctaatcaccgaagatcagaatgtatttaaactgacgtatgaa
agtgtaaaagcagaactggcagaacaagaaattgttctgtctttacaagatgttggaatt
tcattggttaataactacacaaagcaggaggtgtccttcattggaattacaagttctgat
gtggtttgggagacaaaacccaagaagaagtcaagatggagacctatgagtgttaagcaa
actgataaattagaacaagaatttaaagattacagcgagcttactccttcggaaaataag
attattgagttggaatcaaatgttttggtgtgtttaactcctaatggaagtaacatgaaa
attcaacagccaaacgagattcctatcagaagaaattatctgccagctttaaaagtagaa
tacagttcatctgcacatcagaaatctttcagaattcaagtttacaggatacagatacaa
aaccagattcctggagccatatttccctttgtgttctatcctattaaacctccaaagtcc
atcaccctggattcagcaccaaaaccatttactgatgtcagtattgtyatgagaactgca
ggacattcacaaatatctcacattaagtactttaaggtactgattcaggagatggatctc
agaatagaccttggattcctgtatgcattggttgaattctttacacagactgatgtgccc
agtgaccaagagctggaacttttcaaaaaggatgtagaatctcttcaagaagaactaatg
agtgtgtcatcaatggatacgtcacaaatcagcttgtatgaatactttcatatctctcca
ataaagttacacttaagcttttcacttagtacgggtggagaagatagtaacaaagaagaa
agaaagaatgaattgataccacttcagtccttgaatctcctgctgaagagtataggtgcc
acactcacagatgtacaagatgttgtctttaagttggcattctttgaactcaactatcac
ttctgtactacacaacaattgcaatcagcagttataaggcattattcaaaacaggctatt
aaacaaatgtacgttcttattcttggccttgatgtcttgggtaatccatttggattcata
agaggcctctccgaaggagtagaagcattcttctatgaaccttatcagggagccatccag
ggtcctgaagaatttatagaaggaatggcactaggacttaaagcactagtagggggagct
gttggtggattagctggtgctgcttcgagaatcactggtgctatggcaaaaggagtagct
gcaataactatggatgaggattaccagcagaaaagaagagaagccatgaatagacagccc
actggtctaagagagggtatcactcgtggaggaaaaggattagtttctggttttgtcagt
ggtataacaggaatagttacaaaaccaataagaggagcccagaaagaaggagcagctggc
tttttcaaaggtgttggaaaaggtttagtgggagcagtagctaggcctactggaggaatc
atagacatggcaagcagcacatttcagggcattaaaaaagttacagattcatcagaagat
gtgataagcctgcgcccacctcgcttctttggtgaagatggagttattagaccttacaga
ttgagagatggaaccggaagtcaaatgttacagaaaattgaaaatggaagatttgcaaaa
ttcagatatattgcacatgccatggtcaacagtacggatttgttaatggtaacaaaaagt
ggtgtgttatttgtgacaaaaggcacatttggacagctgacatgtgaatggcaatacact
tatgatgaatttaccaaagagccattcattgttgatggcagaagattacgcattgaagcc
aaggaacgagttaagtctgtgttccatgccaaagaatttggaaaaattattaattttaaa
actccagaggatgctaagtggatcctttctaaactggaagaagtgagagagaatcagcca
aaactgtaa
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integrated database retrieval system
