Dromaius novaehollandiae (emu): 112983435
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Entry
112983435 CDS
T07572
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112983435 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dne04131
]
112983435 (VPS8)
Membrane trafficking [BR:
dne04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112983435 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Beta-prop_HPS5
WDR55
ANAPC4_WD40
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112983435
NCBI-ProteinID:
XP_025956328
Ensembl:
ENSDNVG00000009443
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MEAAEQAACPAGAEADPGRPLCPEPPAPRLSVAELDRELDSRSELIDDKEFDIPQVDTPP
TLESILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSL
SLHGSVIRLSLLKGISAQIASAADKVDAGLPTAIAASNLIAVGTSHGLALIFGKDQNQAL
RLCLGSTAIGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTA
ILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVE
LRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQSSVN
PMLAFCRGDVVHFLLVKRDDTGAIHVTKQKQLHLHYDLINFTWINSRTAVLLDSVEKLHV
IDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFY
LGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTSKRKAVIA
DRMVEILLHYADRTLKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRTDLLFNQIYDKMS
ENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENMEACIVHMDITSLDI
QQVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLL
VYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTR
EFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPN
NTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIQMAEKAEFY
QICEFMYERELRYDKIIGCYLHDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQKALDHIE
ELLLLSPCKAADLVAIHFSEQIERXITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCI
TEQFIELLCHYSPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLV
MLERLQSKLLMLTQDDESSADLPLLENIEDTLMKTIALCQRNSHNLNQQQREALWFPLLE
AMMSPQKLSGSSQYRYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQG
LVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQ
ETADEIIVFSCGHLYHSLCLLSKECGLVTKGLMRWTCYKCNSSNKGGKLSENFSELKKGT
GTSLAQAGSESPLDPQQIQAFDQLCRLNRGTSRLALLTELSRNHGGEKHGLLSVSHGDPA
TSSVFQNENFQLHLAPPPLAED
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggagcaggccgcctgccccgcgggggcggaggccgacccgggcaggccg
ctgtgcccggagccgcccgcgcccaggctgagcgtggcggagctcgaccgcgagctggac
tcccgcagcgagctgattgatgacaaagagtttgacattcctcaagttgataccccgcca
acgctggaaagcatcttaaatgagactgatgatgaagaggagtctttcattttggaggat
ccctttctcttgaacatcgataacacagatacgcactcctatgacacatcttctgtagca
agctctgacagtggggaccggactcacctgaaaagaaagaaaaaactccctgattctctc
tctcttcatggatcagttatacggctctcacttctgaaaggaatttctgcccaaatagcg
tctgcagcagacaaagtggatgctggcttgcctactgcaatagcagcatcaaatctgata
gcagtggggacttcccatggattagcactaatttttggaaaagatcaaaaccaggctctt
cggctttgtctgggcagcaccgctattggggctcagtatggggctatctctgctctcagt
atcaacaatgactgttcgaggctcctgtgtggctttgcaaaaggacagatcacaatgtgg
gatctggccagtgggaagctgctacgatcaataacagatgctcatcccccgggaacagcc
attttgcacatcaagtttacagatgacccgacacttgcaatttgcaatgacagcggaggc
tccgtatttgaactgtcatttaagagggtaatgggagtgagaacgtgtgaatctcgatgt
ctcttcagtggctcaaagggggaagtttgctgtattgaaccattacatgcaaaagttgag
ctgagagaccatcctattactcagtattcactgctggccatggcctccctaacaaagata
cttgtcattggcttgaaaccatctctgaaagtgtggatgactttcccctatggtcgtatg
gacccttctagtgtccctcttctggcgtggcactttgtggctgtgcagagctccgtgaac
cccatgcttgccttttgtcgaggagacgtcgttcattttcttctggtaaagagagatgat
actggtgcaatacatgtcactaagcagaagcagcttcatctacactatgacctcatcaat
tttacttggataaactcacggacagcagtgcttctggacagcgtggagaagctgcatgtg
atagatcgccagacacaagaggagctggagaccatagagatctcagaagttcagctagtc
tacaacagcagtcacttcaaatcactggcaacggggggcaatgtcagcgaagcactggca
ttggttggagagaaggcttgttatcagtccatcagcagttgtggtggtcagatcttttac
cttggaactaagtctgttcatgtcatgacattgaggagctggagagagagagttgaccac
cttctgaaacaagagcgtctcactgatgccttggctctagcttggtctttttatgaaggt
aaagcaaaggctgtagtaggtttgtctggggatacaagcaagcggaaagcagtcattgca
gacagaatggttgaaatccttctgcattatgctgatcggactttgaagaaatgtcctgac
caaggaaaaatccaggttatggagcaacattttcaggacatggtgcctgtcatagttgat
tactgtctcttactccagcgcacggatctattatttaaccagatatatgataagatgagt
gagaattctgtagctaaaggcatctttctggagtgcttggagccatacatcttaagtgat
aagttgatgggaatcacagctcaagtgatgaaagacttgctccttcacttccaagacaag
aacagattggaaaatatggaagcctgcattgtgcatatggatatcaccagcttagacata
cagcaggtagttcttctgtgctgggaaaaccatctctacgatgccatgatctatgtatac
aacagtgggatgaacgacttcattagtcccatggagaaactgttcaaagtcattgctcct
ccactgaatgctgggaagtctctcacagatgagcaggtggtaatgggcaacaagctgctt
gtgtatataagctgctgcttggcaggccgtgcatatccattgggtgatattcctgaagat
ctggtacctttggttaaaaatcaggtcttcgaatttctcatccggctgcattcaactgag
ggatctgtggatgaagaggtctatccatatgttcgtaccttgctgcacttcgacactcgg
gaattccttaatgttcttgctctgacttttgaagattttaagaatgacaagcaagctgtg
gaatatcaacagagaattgtggacatacttctgaaagtyatggtagagaattctgacttc
accccatcgcaggttggctgtctctttaccttccttgcccgtcagcttgccaagcccaac
aacacattgtttgtgaacaggaccctttttgaccaggtccttgagttcctgtgcagtccc
gatgatgactcccgccattctgagaggcaacaggtccttttagaattgctccaggcagga
gggatagtacagtttgaagagaaccgccttatccaaatggcagaaaaagctgaattctat
cagatttgtgagttcatgtatgaacgagagcttcgctatgacaaaatcattggctgttac
ctgcacgatccagtgagaaaggaagaagttttcaactacattcacaacatyctctctatg
cctgggtacagtgctgaagagaagcagtcagtgtggcagaaagctttggaccacatagag
gagttgttgttgctgagcccctgtaaagcagccgacttggtagccattcacttcagtgag
cagattgagcgcrtcattacaaaccttcaggaccagttcttactcttccagtttctgagg
agtctccttgacccaagagaaggcatcaatcaggacctgatacacttaccgccctgcatc
actgagcagttcattgagctgctgtgtcactacagcccagaccaggttttggagacgctg
aaagttctggaatactgcaggctggaagaaaccatccagataacacagaaacatcagctc
catgaagcatcctcatatttactggagaagaagggagatatccatggtgcctttctggtt
atgcttgagcgattgcagagcaagttgctgatgcttacgcaagacgatgaaagttcagca
gatctccccctgctagaaaatattgaagatactctaatgaaaacaattgctctttgccag
aggaattcacacaatttaaaccagcagcagcgagaggccctctggtttcccctgctggag
gctatgatgtccccgcagaaattgtctggttcttcacagtatcgatactctgagtctttg
aagagtttgacaatgcaagtgctaaacaacatggctgcgtttattgcccttccttcgatc
ctgcagagaattctacaggatcccgtttatggaaaagggaaacttggagaaattcaagga
cttgtcctgggcatgctggacacttttaactatgaacaaacccttttagagacaactacg
aatcttttaaaccatgatctccactggtccctgtgtaacctaagagcttctgtcactaga
gggcttaccccaaagcaggattactgctgcatttgtctacagcagtacaaaagaaggcaa
gaaactgctgatgaaatcattgttttcagctgtggccacttgtaccattccctatgtctg
ctgagtaaagagtgtgggttagtaaccaaaggcttgatgagatggacgtgctataagtgc
aactcaagcaacaagggaggaaaactgagtgagaacttctcagagttgaaaaaaggaaca
ggaacatccttggcacaggcaggttcagagtctccgttggatcctcagcaaatccaagct
ttcgaccaactctgccgactcaaccgaggaacgtccagattagctctcctgactgaactg
tctcgcaatcatggcggtgaaaagcacgggctgctcagcgtttcccacggtgaccctgcc
acgagcagcgtcttccagaatgagaatttccagctccatctggccccccctccgcttgcc
gaagactag
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integrated database retrieval system
