KEGG   Dromaius novaehollandiae (emu): 112985188
Entry
112985188         CDS       T07572                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:dne00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    112985188 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dne04131]
    112985188 (WDR7)
Membrane trafficking [BR:dne04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    112985188 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd CFAP251_N WDR55 ASA1 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 DSE1_N Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_SCAP PAC11 Beta-prop_WDR19_1st WDR72_alpha-sol KNTC1_N WDR90_beta-prop_4th Tricorn_2nd PD40 DNAI3_WD LRS4 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 112985188
NCBI-ProteinID: XP_025959427
Ensembl: ENSDNVG00000008925
LinkDB
Position
Unknown
AA seq 1487 aa
MAGNSLVLPIVLWGRKAPTHCISTLLLMDDVSMIVTGCHDGQICLWDLSVDLEINPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLLSKISPDWISSMSIIRSNRTQEDTVVAV
SVTGILKVWIITSEVSRMQDTTPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENEQTWTGGDFVSADKVIVWTEDGQSFIYKLPASCLPASDSFRSDV
GKAVENLIPPLLYSVLDRADKQLLICPPVTRFFYGRREFFNKLLIQGDSSGRLCIWSVPD
TLEQQDSAEGLQATTAISLQEAFNKLSPHPAGIIDQLSLIPNINEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKITCLLYPHQVSSRY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLAGKRAAVLFQQVKETIKENIKEHLLDDEDEDEESIRQRREDSDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPGYNQSIGKPSYDGVELGRKMSITEGLGKGTYGVSRAVTTQHLLSVISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPEMSKVKAPPSISSHAAQGQIKQVAPAVSSSTEA
GHSGSDTAPTLHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKETIDAWAPYLPQCIDSVISPGVTTEAIQTGSASPDSLGT
EAKVQEEEHDLVDDDITAGCLSGLPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAID
LIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIA
TARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVD
LLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIR
TGKCQTIHGHKGPITAVAFAPDGRYLATYSNSDSHLSFWQMNTSLLGSIGMLNSAPQLRC
IKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggcagggaatagccttgtgctgcccatcgtcctctggggccgtaaagctcccacgcac
tgcatatcaacgttgctgttaatggatgacgtgtccatgatcgtcacgggatgtcacgay
ggacaaatatgtctctgggacctctctgtagatttagagattaatcccagagctctgttg
tttggtcatacagcctcaattacttgtttatcaaaggcctctgcttccagtgaaaagcag
tatatagtgagcgcatcagaaagcggggagatgtgtctgtgggatgtgaatgatggcaga
tgcatagagtttactaaattagcctgtgcacatactggcatacagttctaccagttcact
gttgggactcagcgtgaagggagactgttatgccatggacattatccagaaattcttgtt
gtggatgctaccagtcttgaagttctttattctttattatcaaagatatctcctgactgg
atcagctccatgagtatcattcgatccaatagaacacaagaggatactgttgtagctgtt
tcggtgactggcattctgaaagtctggataataacctctgaagttagtcgcatgcaggat
actacaccagtatttgaagaggagtctaaacctatttattgtcaaaactgtcaaagcatt
tctttctgtgcgtttacccagcggtcattgttggtagtgtgctccaaatactggagggtt
ttcgatgctggagattattccctcttgtgttcagtccctagtgagaatgaacagacctgg
actggtggtgactttgtgtcagctgataaagtgattgtatggacagaagatgggcaaagt
tttatatacaaattaccagccagttgtctaccagctagtgattcatttcgcagtgatgtg
ggaaaagcagtggaaaatttaattccacctttactgtacagtgtattggacagagcagat
aaacagttattaatatgtcccccagttactcgattcttctatggacgtcgagagtttttc
aataaactcttaatacaaggagactcttcagggagactgtgtatttggagtgtgcctgat
acacttgaacaacaggatagtgcagaagggctgcaagcaacaactgcaatatccctacag
gaagcttttaataaacttagtcctcaccctgctggaattatagaccaattaagcttaata
ccaaacatcaatgaaccacttaaagtgacagccagcgtgtatatcccagcgcatgggcgt
ctggtttgcggtcgtgaagatggaagcattgttattgtgccagcaacacaaactgctata
gttcagcttctgcaaggagagcatatgcttaggagaggttggccacctcaccggactctc
cgaggtcatcgaaacaaaattacatgtttactgtatcctcatcaggtttcttctcgttat
gatcaaaggtatttgatctcaggtggtgtggatttctcagtcatcatatgggatatattt
tctggagagatgaaacatatcttctgtgtacatggtggagaaattacacagcttctagtt
ccaccagaaaactgtagtgcaagagtccagcactgtatttgctctgttgccagtgatcac
tcagtaggtcttctgagtttgcgggagaaaaaatgtatcatgctggcatcccgtcacctt
ttccccatccaagtaataaaatggaggccttcagatgactacctggtggtgggatgctcg
gatggatctgtgtatgtctggcaaatggatactggtgcgctggacaggtgtgtgatggga
ataacagcagttgaaatcttgaacgcttgtgatgaggcagttccagctgctgtggactcc
ctcagtcatccagctgtcaacctgaagcaggccatgacaagacgtagtctggctgctctg
aaaaatatggcacatcagaaactacagactcttgccactaaccttttagcttcagaagca
tctgacaaagggaatttacctaaatattcacataactccctgatggttcaagctataaag
accaacttaacagatccggatatacacgtgctcttctttgatgtagaagcactgattatt
cagctgctgacggaagaagcctctaggcctaataccgcacttatttccccagagaacttg
cagaaagcatctggcagctctgacaaaggaggctcttttctggccgggaaacgagcagca
gttctcttccagcaggtcaaggaaaccatcaaagagaatataaaagaacatcttctygat
gacgaagatgaggatgaagaatcaataagacagagaagagaggacagtgacccagaatat
cgctctagcaaatctaaaccattaaccttgttagaatataacctaaccatggatacggca
aagctttttatgtcctgtcttcacgcctggggcttgaattctgttctagatgagctttgc
cttgatcgtcttgggatgcttaagccacactgttccgtgtcctttggcctgctgtctaga
ggaggccacatgtctctcatgcttcctgggtataatcagtctataggtaaaccatcatat
gatggtgtggaattaggaagaaaaatgtccattaccgaaggactaggaaaggggacatac
ggtgtatcacgtgctgtcaccactcagcatctcctgtctgttatttcactggcaaacacg
ctgatgagtatgactaacgcaacttttattggagaccatatgaagaaaggtccaaccagg
cctcctaggccaggcactcctgagatgtcaaaagtgaaggcacccccttcaatttcaagt
catgcagctcaaggacaaattaagcaagttgctcctgctgtttcttctagcactgaagct
ggtcactctggctctgacactgctcctactttacatacctgtttcttagtaaatgaaggg
tggagccagcttgctgccatgcactgcgttatgctccctgacctgttaggactggataaa
ttcagacctcctcttctggagatgctagctcgcaggtggcaggaccgatgcttggaggta
agagaagctgcccaggccttgctgttagcagaattgcgaagaatcgaacaggcaggtcgg
aaagaaacaattgatgcgtgggctccatatttaccgcagtgtatcgacagtgttatatca
ccgggagtgacgacagaagccattcagacgggtagcgcgagccccgattccctggggaca
gaagcgaaagttcaggaggaagagcatgacctcgttgatgatgacatcacagcgggttgt
ctgtccggtctcccacaaatgaaaaaaatatctacgtcgtatgaggagagaaggaagcaa
gctaccgccattgtcttgcttggagtgatcggagcagaatttggagctgaaattgagcct
ccaaaactcctgactcggccacgcagttctagtcaaattcccgagggatttggtttaact
agtggtggatcaaattattccttggcaaggcatacgtgcaaggcgctgacgttcctgctg
ctgcagccgcccagccccaagctgcccgcgcacagcaccatccgccgcaccgccatcgac
ctcatcggccgcggcttcaccgtctgggagccctacatggacgtctccgccgtgctcatg
gggctgctggagctctgcgccgacgccgagaagcagctcgccaacatcacaatggggctg
ccgctgagccccgcggccgactcggcccgctcggcgcgccacgcgctctcgctcatcgcc
acggcccggccacccgccttcatcaccaccatcgccaaggaggtgcacaggcacacggcc
ctggccgccaacacgcagtcccagcagaacattcacaccaccacccttgcccgggctaaa
ggagagatcttgagagtcatcgaaatattgattgagaagatgcctaccgatgtggtggac
ctcctcgtggaggttatggacatcatcatgtattgccttgaaggatctctagttaagaaa
aaaggtcttcaggaatgctttccagccatctgcaggttctacatggtcagctattatgag
cggagtcacaggatagcggttggagctcgccatggttcagtggccctctatgacatccgg
actgggaaatgtcagactatccacggccataaaggacccataaccgcggtagcttttgcc
cctgatggccggtaccttgccacgtactccaattcggacagtcacctctccttctggcag
atgaacacctcgctgctgggcagcatcggcatgctgaactcggcgccccagctccgctgc
atcaagacctaccaggtgccgccggtgcagccggcctcgccggggtcccacaacgcgctc
aagctggcccgcctcatctggacctccaaccgcaacgtcatcctcatggctcacgacggc
aaggagcaccgcttcatggtctag

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