Dromaius novaehollandiae (emu): 112986662
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Entry
112986662 CDS
T07572
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03008
Ribosome biogenesis in eukaryotes
dne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112986662 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
112986662 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dne03021
]
112986662 (XRN2)
03019 Messenger RNA biogenesis [BR:
dne03019
]
112986662 (XRN2)
03009 Ribosome biogenesis [BR:
dne03009
]
112986662 (XRN2)
03016 Transfer RNA biogenesis [BR:
dne03016
]
112986662 (XRN2)
Transcription machinery [BR:
dne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112986662 (XRN2)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
112986662 (XRN2)
Ribosome biogenesis [BR:
dne03009
]
Eukaryotic type
Pre-60S particles
RNases
112986662 (XRN2)
Transfer RNA biogenesis [BR:
dne03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
112986662 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
112986662
NCBI-ProteinID:
XP_025961823
Ensembl:
ENSDNVG00000001274
UniProt:
A0A8C4IZ46
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKASIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCSLCNQMGHEVKDCQGLPREKQGKHDQFADSLPTSEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDHPSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNSTTSSSPNTSL
TSDGTPSPAGGIKRKAEDSDSEPEPEDNIRLWEAGWKQRYYKNKFDVDASDEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFDGIADMPSDFEKGSKPFKPLEQLMG
VFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEENRRNSLGGDVIFVGKHHPLCDFIVELYKSKNEEPVDMPPELCHGIQG
KLTLNENAVLPDQTVESPVPMLRDLTQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPPPV
LKPGDWEKNSSDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHSIPRERGMPGMYANAVPLG
AYGNPYSRPLLSGQQQIPKLLSNLRPQDSWRGPTPLFQQSPQRSAGAAPLLAWNRMLPSQ
SQYQPSQYQGLGGPMGYPQRPEDRMDRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttcttccgctggctcagccgcaagtacccgtccatcatcgtcaac
tgcgtggaggagaaggctaaagagtgcaatggtgtcaaggcttcaattgataccagcaaa
cctaatcctaatgaggtggagtttgataatctgtatttggatatgaatggtataatccac
ccttgtacacatccagaagacaagccagcacccaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatcttcaacattgtaagaccaaggcgacttctctacatg
gctatagatggagtagctccacgtgcgaaaatgaatcagcaacgatcaagaagattcaga
gcatcaaaggagggaatggaagctgcggaagagaagcaaaaaataagacaagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagagatttgacagcaactgtatt
accccaggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttaaacagtgacccaggttggaaaaatttgacagttattttgtctgatgctagtgct
cctggtgaaggtgaacataaaatcatggattatattagaagacaaagagctcaaccaaac
catgacccaaacactcatcactgtctgtgtggggctgatgctgatctaattatgcttgga
ttagctacacatgaaccaaatttcactataattagggaagagtttaaaccaaataaaccc
aagccatgtagtctttgtaaccagatgggtcatgaagttaaggattgccaaggcttgccc
agagaaaaacaaggcaagcatgatcagtttgcagacagtcttcctacctctgaacaagaa
tttatcttcattcgattatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgccttttacttttgattttgaaagaagcattgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccatctttggagatcagggagggagcaatt
gatcgcttggttaacatatataaaaatgtagtgcacaaaactgggggatacctcacagaa
agtggttttgtcaacctacagcgagtccagatgatcatgttagctgttggagaagttgaa
gatagtattttcaaaaagagaaaagatgacgatgacaacttcaaaagacgacaaaaagaa
aaaagaaaaagaatgaagcgggatcatccttcttttattcctggtggacagttttcccct
caagctctgggaaatcgatctagtcctcaggcaatcagcaatcctcgacagactgccttt
gaaatgagaatgcatgaccgacaaaattctacaacttcatcatctccaaataccagtctc
acttctgatggcaccccatccccagcaggaggaattaagcgaaaagctgaagatagtgac
agtgaacctgagccagaggataatatcaggttatgggaagctggttggaaacaacgctat
tataaaaataaatttgatgttgatgcatctgatgagaaattccggcgtaaagttgtacag
tcctatgttgaagggctttgctgggttctcagatactattatcagggctgtgcatcctgg
aactggtattacccttttcactatgctccatttgcgtctgactttgatggcattgcagac
atgccctcagattttgagaagggctcaaaaccgttcaagcctcttgaacaacttatggga
gtatttccagctgcaagtggaaattttctgccaccaacctggaggaagctcatgacagat
ccagaatcaagcataattgacttctaccctgaagactttgctattgatttaaatgggaag
aagtatgcttggcaaggtgttgccttgttgccatttgtggatgagcgacgtcttagagct
gccctggaagaagtgtatcctgaccttactcctgaagaaaatagaagaaatagccttggt
ggtgatgttatctttgttgggaagcatcatccactttgtgattttattgtggagctgtac
aagtccaaaaatgaagagccagtggatatgccaccagaactgtgccatggaatccaggga
aaacttacactgaacgaaaatgcagttcttccagatcagacagtggagtctcctgttcca
atgttacgtgatcttacacaaaattctgcagtcagtatttctttcaaagatccacaattt
gatgaagactttgttttcaaggctatagtgttacctggtgcaaagaaacctcctccagtc
cttaagccaggagactgggaaaaaaacagcagtgatggtaggccttggagaccacagctt
ggttttaatcgagacagaaagccagtccatttggatcagtcagcatttagaactttaggc
cattcaataccaagggaaagagggatgccaggaatgtatgccaatgcagtaccacttgga
gcttatgggaacccgtacagcaggccgcttctaagtgggcagcagcagattcctaaattg
ttgtcaaatcttaggccccaagattcttggcgaggtccgacacctttgtttcagcagtca
ccacaaagaagtgctggggctgctcctcttctcgcctggaaccgcatgctgccatcccaa
agtcagtaccagccgagtcagtaccaaggactaggcggaccaatgggttacccacagaga
cctgaagatcgtatggacaggggaagacaggcatatggccccgggaggccctacccgtta
ccacctccctcaggaagatacagctggaattag
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