Dromaius novaehollandiae (emu): 112987457
Help
Entry
112987457 CDS
T07572
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112987457 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112987457 (CNOT1)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112987457 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112987457 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
112987457
NCBI-ProteinID:
XP_025963154
Ensembl:
ENSDNVG00000007982
LinkDB
All DBs
Position
Unknown
AA seq
2386 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLQIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTANSIAASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLN
PTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRM
RVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQ
DNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQI
RLKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMT
ELEQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGAD
ADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLV
NMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAH
SRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLR
EWVNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEIS
YRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIV
VGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTK
APGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQI
LYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNL
KVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRY
NIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAI
ANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELI
KNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaatcggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccacttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtcttgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgcttttctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagacttcatgcaa
gaagttggctatggcttttgtacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttggggatgatggctcggact
cattcggggttgacggacggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgatggagcacaagcccacacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagtttggacttcaaagtggtaacctatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcttgcagattgtggtgtttggg
atccagagagggctaggcatggaagtcttcccagttaacgccatatatagaccttggaaa
cacgcagagggccagctctccttcattcagcattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgcaacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcactgc
ccagatatgttggtattggccttattgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgccagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgcatgactttctta
aagagaagatgtccatcgatcctgggtggcctggctccagaaaaagatcagcccaaaagt
gctcaacttcctccagaaaccttggcaactatgttggcttgtctccaagcttgtgctggg
agtgtgtctcaggagctgtcggagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagccaccacctggagtcatgccaaaaggccgtccacctagtgct
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcgtttccccctctttccacccag
aaccagacaacaggtttcagtggcattggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggtataggaactggggcccttggcctccctgcagtgaac
aatgacccattcgtgcaaaggaaactgagcacatctggactgaaccaacctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctactttcaacgtatttataaccatccacca
catccgaccatgtctgtagatgaggtgttagagatgctacagagatttaaggactccaac
attaaacgggaacgtgaagtgtttaactgtatgctgaggaacttgtttgaagaataccgt
ttttttcctcaatacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacttacaggagtacatagaatatggacagcagtccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcactcgtccaactggagtc
agcttcaagaaagatgtgccgccttccattaatacaactaacattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgttcaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacaaaaggttgaggagctgaaggaa
acagtgaaagaagagttcatgccttgggtatcgcagtatcttgtcatgaaaagagtcagt
attgagccaaactttcacagcttatattctaacttccttgacactcttaagaatccagag
tttaataagatggttctgaacgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcattggctggga
atgattacgttggctaaaaacaagcccatcttgcacacggatttggatgtgaaatcactg
cttctggaagcatatgttaagggacagcaggaactgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtgttcaggcctccaaacccgtggacaatg
gccattatgaatgttttagctgagctgcatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaaccttgcactggacatcaatgagctgaaacctgga
agtctcctgaaagataaagatcggttgaaaaatctggatgagcagctatctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacagctaattctatagctgct
tctacaactccagctaccagcaccacttgtacagctacggttcctccgcagcctcagtac
agttaccatgacatcaatgtctactctttaggagggttggctccacatattaccctaaat
ccaacgattccactgtttcaggcccaccctcagttgaagcagtgtgtgcggcaggctata
gagcgagcagtgcaagagctggtccatccagtggtagatcggtccattaagattgccatg
actacttgtgaacagatagtcaggaaggactttgcactggattcggaagagtcacgaatg
cgtgtagcagcacatcatatgatgcggaacctgactgctgggatggccatgattacctgt
agggaacctttgctgatgagcatagctaccaacttgaagaatagttttgctactgcactg
agggcagcctccccacaacagagggacatgatggagcaagcagctgcccagttagcgcag
gataattgtgagctcgcatgctgctttattcagaagacagctgtggaaaaggcgggccct
gaaatggataagaggctagcaactgaatttgagctcagaaaacatgctaggcaagagggt
cgtcggtactgtgatcctgttgtgttaacttaccaagcagaacggatgccagaacagatc
aggttaaaggttggaggtgtggatccaaaacagctggctgtttacgaagagtttgctcgc
aatgtccctggcttcttacctaccaatgatttaactcagcctacgggattcttggctcag
cctatgaagcaagcctgggctacagatgatgtagcacaaatctatgataaatgtatgaca
gaactggagcagcacctgcagtccattccacataccctggccatgaatcctcaagctcaa
gctttgcgcagcctcttggaggctgtggtagtggctcgtaactcacgtgatgctattgct
gcacttggactgctgcagaaggctgttgagggcttactggatgccacgagtggggcagat
gctgacctcctgcttcgctatcgtgagtgtcatctgcttgtgctgaaggctctgcaggat
ggccgtgcatatggatctccatggtgtaacaaacaaattactaggtgcctgatcgaatgc
agagatgagtacaagtacaatgtggaagcagtggagttgctaatccgcaatcaccttgtt
aacatgcagcagtatgatcttcacttggctcagtcgatggagaatggcttgaactacatg
gcagtggcatttgccatgcagttggtaaagatcctcttggtggatgagagaagtgttgcc
cacgtaacagaggcagatctgtttcacaccattgagacgctcatgaggattaacgctcac
tccagaggaaatgccccagaaggattaccccagttgatggaagtggtccgatcaaactat
gaagccatgattgaccgtgctcatggaggtcccaatttcatgatgcattctggaatatcc
caagcctctgagtatgatgacccaccaggtctgagggagaaggcggaatatctactgagg
gaatgggtgaacctctaccattcagctgcagcaggccgtgacagtaccaaagctttctct
gcgtttgttggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaa
acggatgacctgataactcgattttttcgtctttgcactgaaatgtgtgttgaaatcagc
tatcgtgctcaggctgagcaacagcataaccctgctgccaaccccacaatgattcgagcc
aagtgctaccacaatctggatgcctttgtgcgacttattgcactgctagtgaagcactct
ggggaggcaaccaacacagttacaaaaatcaacctcctgaacaaggttctcggtattgtg
gtgggagttcttctgcaggaccatgatgtccggcagagtgaatttcagcagcttccttac
catcgcattttcatcatgttgctgttagaattaaatgctcctgagcatgtgctggagacc
atcaacttccagacactcacagccttctgtaacacatttcacatcctgaggcctacaaaa
gctccaggttttgtttatgcctggctggaactgatctcccatcggatatttattgcaaga
atgctggcacatacaccacagcagaagggttggcctatgtatgcccagttactgatcgat
cttttcaagtacttggctccttttcttagaaatgtggaactcaccaaacctatgcaaatt
ctttacaagggtaccctgcgagtgttgctggtcctgttgcatgatttcccagaatttctg
tgtgactaccactatgggttctgtgatgtgatcccccctaactgtattcagctaaggaac
cttatcctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaacctg
aaggtggacatgctgagtgagattaatattgctccacggatacttaccaatttcactggc
gtgatgccacctcagttcaagaaagacttggattcttatctcaaaacccgttctcctgtc
actttcttgtctgacttgcgcagcaacctacaggtatcaaatgaacctggcaaccgctac
aacatccagctgattaatgcactggtgctctacgtaggtactcaagctattgcgcacatt
cacaacaaaggcagcacaccctccatgagcactatcacccactcagctcacatggacatc
ttccagaatttggctgtagatttggacactgaaggtcggtaccttttcttgaatgcaatt
gccaatcagctgcgatatcccaacagtcacacccattacttcagttgcaccatgctttac
ctgtttgcagaggccaacaccgaggctatccaggagcaaatcactagggttctcttggaa
cgactgattgtaaataggcctcatccctggggtctccttattactttcattgagctgata
aaaaatccagcatttaagttctggaaccatgagtttgttcactgtgctccagagattgag
aagttgttccagtcagttgcacagtgctgtatggggcagaagcaggcccagcaagtaatg
gaagggactggtgccagttag
DBGET
integrated database retrieval system
