Dromaius novaehollandiae (emu): 112987695
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Entry
112987695 CDS
T07572
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dne
Dromaius novaehollandiae (emu)
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dne03036
]
112987695 (DICER1)
Chromosome and associated proteins [BR:
dne03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112987695 (DICER1)
microRNA pathway
RISC loading complex
112987695 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
112987695
NCBI-ProteinID:
XP_025963471
Ensembl:
ENSDNVG00000011958
LinkDB
All DBs
Position
Unknown
AA seq
1920 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLA
IQDHPYREIMKICEDCPACPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLKELDEALTFLNDCNISVHSKERDSTLISK
QILSDCRAVLIVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETE
TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPSSSLVENENYCKHSTIVVPENAAHQGANR
TSSAEKHDQMSVNYRTLLNESPSKLQIDVSAELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQEIPVQPTTSCPIQNLYSSENQPKPSNECTLLSNKYLDGNANRSTSDGCPKMA
VTTSTSKALNLSIDRVDFEKSPSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNTDKWEKDEMAKENLANGKLEDYDDEEEDEDLMWRLPKEEADFEDDF
LEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSNYEWKAPKKSSLGNVQFSSDFDDFD
YSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIADC
VEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCAARENCNSQQKNLSPNSV
SASVVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAY
LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN
TIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDI
EVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEP
ETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccctgctttgcaatccctcagcatggcaggactgcagctcatgacccctgct
tcctccccaatgggtccgttttttggactaccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataatacg
atagtctgtttaaacactggctcagggaagacttttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatttcaacaaaaatggaaaaagaactgtgttcttggtc
aactcagcaaatcaagtcgctcaacaagtgtcagctgtcaggacacattcagatcttaaa
gtaggagagtattcaagtttagagataactgaatcatggacaaaagagaaatggagtcag
gaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttttgaga
aatgaatatttatccctgtcaaacattaatcttttggtgtttgatgagtgccatcttgca
atccaggaccacccatatcgtgaaattatgaagatctgtgaggattgtccagcatgtcct
cgaatcctgggattaacagcttccattttaaatgggaagtgtgatcctgctgagttagag
gagaagatccagaaactggagaaaattttaaagagcaatgctgaaaccgcaacagatttg
gtggtcttggacagatatacttctcagccatgtgagattgttgtagactgtggaccatat
actgacaaaagtgggctgtatggaagactattaaaggaattggatgaagcacttactttt
ctaaatgactgcaacatatctgtacattcaaaagagagagattctacattaatttctaag
cagatactgtcagactgtcgagctgtattgattgttttgggaccctggtgtgcagataag
gtagctgggatgatggtgagagagctacagaagtatatcaaacatgaacaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcacctgcctcacttgatctgaaatttgtaaccccaaaagtaataaagctg
cttgaaatcttgcgcaaatataaaccatatgaacgacagcaatttgaaagtgttgaatgg
tataacaataggaatcaggataattacgtatcttggagcgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccagagactaatttcccatctccttttactaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgtcctaaataggttg
ataaaagaagctggcaaacaagacccagaactggcttatatcagcagcaattttataact
ggacatggcattggcaagaatcaacctcgtaacaagcagatggaagtagaattcagaaaa
caggaagaggttcttagaaaatttcgagcacatgagaccaacttacttattgctactagt
attgtagaagagggtgttgacataccaaaatgcaacttggtggtgcgttttgatttgcct
acagaataccgttcctatgtacagtcaaaaggaagagctagagcaccaatttccaattac
atcatgttagcagatacagacaaaatcaaaagttttgaggaagatcttaagacatataaa
gcaattgaaaagatcctgagaaacaaatgctcaaaatctgttgataccagtgaaactgaa
actgaacccattgttgatgatgatgatgtatttccaccctatgttttgaggccagatgag
aacagtccaagagttacaattaacactgctattggacacataaataggtactgcgctaga
ttacccagcgatccatttacccacctagctcccaagtgtaaaacccgagaactacctgat
cataccttctactctactctctacctgccaatcaactcacctcttcgagcctcaattgtt
ggtcctccaatgagttgtgcaagactggctgagagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttgatgccagttgggaaagaaacggta
aagtatgaggaggagcttgatttacatgatgaagaagaaactagtgttccaggaaggcca
ggctctacaaaacgaagacagtgctatcctaaagctattccagaatgtttgagggatagt
tatcccaaacctgatcagccatgttacctgtacgtaataggaatggtgttaactactcct
ctgcctgatgagctcaacttcaggaggcgaaagctgtaccctcctgaagatacaacaaga
tgttttggaatattgacagccaaacctatacctcagattcctcactttcctgtgtatact
cgctctggagaggttacaatatctattgagctaaagaaatctggttttactttgtctctg
caaatgcttgagctgataacacgactccaccagtacattttttcacatattcttcgtctt
gagaaacctgcactagagttcaaacccacagaagccgattcagcctattgtgttctacct
cttaatgttgttgatgactccagcactttggacattgactttaagtttatggaagacatt
gaaaaatctgaagcacgtacaggcattcccagtacgcaatatacaaaagaaatgcctttt
attttcaaattagaagattaccaggatgcggttatcattccaaggtatcgaaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattataaaacaaagtataatcttgacctg
accaatctcaaccagccgctgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgccatttgaatcagaaggggaaagcacttccactaagcagtgctgagaagagg
aaagcaaagtgggaaagtctgcagaataagcagatactggttccagagctctgtgctatc
catcctattccagcatcactgtggagaaaagcagtttgcctccccagcatactttatcgc
ctgcactgtctattgacagcagaggaactaagagctcaaacagccactgatgctggtgta
ggggttaaatcacttcctgcagatttcagatatcctaacctggactttggatggaaaaag
tctattgacagcaaatccttcatctctattcctagctcctctttggtagagaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaataga
acctcttctgcagaaaagcatgaccaaatgtctgtgaattacagaacattgctcaatgag
tcacccagtaaactccaaattgatgtctcagcagaacttgcagcaattaatggtgtttct
tataayaaaaatcttgccaatggcaattgtgatttagttaacagagacttttgccaagga
aatcagctgaattactgcaggcaggaaatacctgtacaaccaactacctcatgtcccatt
cagaatttatacagcagtgagaaccagcccaagcccagcaatgaatgtactctactgagt
aataaataccttgatggaaatgctaacagatctacctcagatggatgccccaaaatggca
gtgaccaccagtacttcaaaagctcttaatctttcgatagacagagtggactttgaaaag
agcccttccagcgggtactcctcaaaaactcttggccccaatcctggtctcattcttcaa
gctttgactctttcaaacgctagtgatggttttaatctggagcggcttgaaatgcttggt
gattcatttctaaagcatgccatcactacatacttgttttgcacttatcctgatgctcat
gagggacggctgtcatatatgagaagcaaaaaagtcagcaactgtaatttgtatcgcctt
gggaaaaagaaaggactgcctagtcgtatggtggtatcaatttttgacccccctgtcaat
tggcttccgcctggttacatagtgaaccaggacaagagcaacactgataaatgggagaaa
gatgaaatggcaaaggagaatttggctaatggtaaacttgaagattatgatgatgaggag
gaggatgaagacctgatgtggaggttacccaaggaagaagcagactttgaagatgatttt
ttggagtatgatcaggaacatatcaaattcatagataatatgttaatgggatcaggggct
tttgtgaagaaaatttctctctcgcccttttcaaccactgattcaaactatgaatggaaa
gcacccaaaaagtcatccctgggtaatgttcagttttcatcagatttcgatgattttgac
tatagctcttgggatgctatgtgctatctggatcctagcaaggctgttgaagaggatgat
tttgtagtgggcttctggaacccatcagaagaaaactgtggtgttgatgcaggaaaacag
tctatctcatatgacttgcatacagaacagtgtattgctgacaaaagcattgcagactgt
gtggaagccttgttgggctgctatctgaccagctgtggcgaaagagctgctcagcttttc
ctgtgttcgttggggctgaaggtgctccctgtaattaaaaagactgattgggaaagcact
ttgtgtgctgccagagagaactgtaacagtcagcagaaaaatctttcaccaaactctgtt
tctgcttctgtagttaattcagagccttctctgtataaagacctggagtatggctgtttg
aagattccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctgaatcatctt
atttctggctttgagaactttgagaagaaaataaactacagttttaagaacaaggcgtat
cttcttcaggcatttactcatgcctcttaccattataataccataactgattgttaccag
cgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttatgaa
gacccacggcaacactctccaggagttcttactgacctacgatctgctctagtcaataat
accatttttgcatcactagctgtaaagtatgactaccacaagtacttcaaagctgtctct
cctgaactgtttcatgttattgatgactttgtacagtttcaaatggaaaagaatgaaatg
caaggaatggattcggagctcagaagatctgaagaagatgaagaaaaagaagaagacatt
gaagtaccaaaggccatgggggatatattcgagtcccttgctggtgccatttatatggat
agtggaatgtctttggaaatggtttggcaagtgtactatccaatgatgaggccactaata
gaaaaattttctgcgaatgtgccccgttccccagtgcgagagctgctggagatggagcca
gagacagccaaatttagtcctgcagaaagaacttacgatggaaaggtcagagtaacagtg
gaagttgtaggaaagggcaagtttaaaggtgttggcagaagctacaggattgccaaatct
gcagctgcaagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaacagc
tga
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integrated database retrieval system
