Dromaius novaehollandiae (emu): 112987929 Help Entry 112987929         CDS       T07572                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism dne  Dromaius novaehollandiae (emu) Brite KEGG Orthology (KO) [BR:dne00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dne03400]     112987929 (SPG11) DNA repair and recombination proteins [BR:dne03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      112987929 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Borrelia_orfA Motif Other DBs NCBI-GeneID:  112987929 NCBI-ProteinID:  XP_025963822 Ensembl:  ENSDNVG00000007977 LinkDB All DBs Position Unknown AA seq 2427 aa AA seqDB search MEGAKRELRILLAPLSEEAQASLRDAARVQLSGGQDALGSLLAPGGIYLQSLVPGSGGRA RGSVLPGDWADFMWESTEDYDLQADKTKILTLSKSHELFVYEFTIEDGKXNLISLHSCKE DALKNLLEVKNISLSSVWSSKILSFKDNTCILLLNNFILVHFTFPGEDSHLETCDCFTLD MPPQVLERITDTNFCRGILFLLDSSGWIYIFDSFDGAHLATIDVALCQGDMEDEDRSTAI PLPLTAAKVSHDLSVAVIISSSNCAISVDLNMYFRQFPEHLLCKRDPENLPMKPPEGLDE DDLASSDYSMELMTLSFRTDRSWKAHLSSLSNVIRKRKPDYPNLVYGNLPWYQYFPHVEY HDSVIYEDSEEAVAVVPQDVPCVLSKQLQNDGTDISDGGQQWKQIPVEGSQEMVKLECKS VTAYKALFVVLTSDKGLTVAVWDLESQDVSYYHFGKNCVYVDCREAPLCLLLTEDGLSLI LFGLTQEEFLNRLMIYGSAGVVDAVCHLNGWGRCSIPIHALEAGLENRQLDTVDLFLKSK ENLFNLSASCSGSEQTTDTASQLYLKNLEELRPALNLLCSAIRANDLETQSKHFSEQLLN LTLTFLNEQLEGIFLHTEELDEYLQKAANILSDYIIDLRTFVIKFPRLQTNPIHIGGDLD EDMPTIEESQMWEKLTTEEVIADAILSNKVPEAQTFFHIRQHPAQSIQEFIQIGLNLVYD RLLKENTREASELLRNMGFDVKEELHKICFYTVDKSVRDLLVKVLQEENYFSEKEKKMID FVHQVENVYSESFQENKEIQSLSSFTNWRKEQEFSRHTAVLDSFLNCDKHQVHNRELRVM FNWAQWWDELIQEMILLPRKTREEFKTCNPEVLWRHLTAQHDWRSLCSWIEESEPHQTLC GPVNWPLLTPDIIDRNMLCSGYMRNEILDKLARNGIFVLSELEDFELLLQRLSCLGGVMQ NPHPVPKYNAASGLDFHACFVLHCLERNLQYLLYTYLDYYSLTPSNCPILDNKELHEAHP WFEFLVQCRGVASNPRDPKMIFQASLANAQILIPSNQASVNSMLLEGRTLLALATTMYAP GGIDQVLQNEDKERTVKKVDPQLLKMALAPYPKLKAALFPQCTSHGILPPDISLYHLVQS LVPFDPTKLFGWQSTNTLALSDTSSDFPHFSSPELVNKYAVMERLDFLYYLHHGRPSFAF GTFLVQQLVRSKCPKQLIQQAGNEAYLLALSFFHIPSIGAACVCFLELLGLDSLKLRVDI KVANIIFNYKTRKEESQHNLIRESFVXKLTKLADGEKAAAAEILTCLEEAFWDTVEHQGI NKTSNDSRRQWSLVMQFCKLHNTRLSTSYLKECAKSNDWLQFIIQTQLYGYQPBEVISIL QDFTPILQDHLTLALEKLPFLCXDIGSPQNSATSMSESKNEDSLFQILFQCQGNSNPSCY LLTEGMRQHAPFLSVLAACFQDANIIQCLCVWIITTVDNVTRAEATNHIQSSVENHEWDL HDLSVIWKVFLRKEKSKTLINGFQLFLKDSPLLYLLEMYELCMNFKKYIEAKTKLDKFQT SLTELKTADELTPSQLPVQWLESQALFLLELMMQQCRTEYELGKILQLFAAANDLLLDGP YVKKLCALSETLQDSSISINRAILTSYNTETFQNECRSILEQLQEKGMFSLARKVAELXE LPVDNVVTQEVLRDLSLLRNTGQWHQNQTRIEFWXKCNDSFMKNSISSKAASDFFLNQAD TVFESSAPDKINTITEKHLLLTLAGHWLAENDSVSLDKLEEIEKQIWICRITQQTLSTYA GSGKSSFSXRVLENGDLTFDNLAKEFSFSKLPALNTPKYLKLEGLAFRESQQTLTKDEEE SLKFLIGRLLDEGSVHEASRVCHYFQFYNRDVSLVLHCRALASGEADLDKLDTDIQTLLV AREKTDENSASQPSRIPSTSSLEDWTHIVAPSPDDHVVVSLKALIDECVHGRNYCRQVLC LYELSKELNCSYSEMSAHDPEKVLRAILSSHQPDRCKKAQAFITTQGLQPETVAELAAEE IMQELLVSSEGKGQKQVSNPAVESQAFLQLAKLCKDHTLVGMKLLDKISSVPCGELSCIT ELLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPNEEYGLVVRLLTGIGRYNEMTYIF ELLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHE AAACIQLKLIESQPWEESLQDVANLKKLLMKALTLFIDAAESYSKDSCVRQALRCKRLTK LITLQLHFLNTSQRTMLINLNRPNLMDCIMSLPRFYQAAIVAEAYDFVPDWAEVLYQQVI TKGDFNYLEEFKQQRLLKPSIFEEVAKKVKHHPPTDAALKNLKKLLTYCEDIYTYYRLAY DNKFYDVVNMLLKDAQTGCCLNDMLAN NT seq 7284 nt NT seq  +upstreamnt  +downstreamnt atggagggggcgaagcgggagctgcgcatcctgctggctccgctctcggaggaggcgcag gcctccctgcgggacgcggcccgggtccagctgagcgggggccaggacgctctgggcagc ctcctggcccctggggggatctacctgcagtcgctggtgccgggcagcggcggccgggcc cggggcagcgtcctcccgggagactgggctgacttcatgtgggagagtacagaagattat gatctgcaagcagacaagacaaaaatactgacacttagtaaaagtcatgaactgtttgtc tatgaattcactatagaagatggaaaayacaacctcatttccctgcacagttgtaaggag gatgcacttaaaaacttgcttgaagttaaaaatattagtctttcttcagtttggtcttca aagatcctatcttttaaggacaacacatgcatacttctgctcaataattttattcttgtg cattttacctttcctggagaagactctcacttagagacgtgtgactgctttacccttgat atgcctccacaagttttggaaagaataacagatacaaatttctgcaggggaattctgttt ttgttagatagttctggctggatttatatatttgattctttcgatggtgcacatctagca accattgacgtagcactctgccagggagacatggaggatgaggacaggagtacagccatc ccattgccgctcactgcagcaaaagtgtcacatgatctcagtgttgctgtgatcatcagt tcttccaactgtgccatttctgtggatctaaacatgtatttcagacagttccctgagcat ttgctctgtaagagagatcctgaaaatcttccaatgaagccacctgaaggacttgatgag gatgaccttgctagttctgattacagtatggagcttatgacattgtctttccggacagac aggtcctggaaggcacacttatcctcactgtctaatgtaataaggaaaagaaaaccagat tatccaaatttggtgtatggcaatttgccttggtaccagtattttccccacgttgaatat catgattctgttatctaygaagattctgaggaggctgtggctgttgttccgcaggatgtt ccatgtgtcctttccaaacaattacaaaacgatggtacagatatcagtgatggaggacag cagtggaaacaaatacctgttgaaggatcacaagaaatggtgaaactggagtgtaaatct gtgactgcatataaagcgctgtttgtagtattaacaagtgacaaaggattgactgttgct gtctgggatttagaatcacaagatgtgtcgtattaccacttcggcaaaaattgtgtttat gtggattgtagagaagcaccattatgtttacttctgacagaggatggtctctccttaatt ctgtttggtctaactcaagaagagttcttgaatagattgatgatctatggcagtgctggc gtcgtagatgccgtttgtcatctcaatggatggggacgatgttcaattcccatacatgcg ctagaggctggtttggagaaccgtcaactagacacagtagacttgtttttaaaaagcaaa gaaaatcttttcaatctttctgcatcctgctctggatctgaacagactacagatactgca tcccagttgtacctgaaaaatttggaagagctgaggccagcattaaatttgctttgctca gcaatcagagcaaatgatttggagactcaaagtaaacacttttctgagcagctgctaaac ctcacattgactttcctcaatgaacaacttgaagggatttttttgcatacagaggaactt gatgaatacctgcagaaggccgcaaatattttatcagattacattattgaccttagaaca tttgtgatcaagtttcctcgactgcagacaaatcccatacacataggaggtgatcttgat gaagacatgcctacaatagaggaaagccaaatgtgggagaaactaacaacagaggaagtc attgctgacgccattttaagcaacaaagtaccagaggcccagaccttcttccatatacgt cagcatcctgctcaaagtattcaggaatttattcagataggtttaaatttggtttatgac cgtcttctaaaggaaaataccagagaggcctcagaacttttaagaaacatgggttttgat gtgaaggaagaattgcataagatatgtttctacacggttgataaaagtgtacgagatttg ttggtgaaagttttacaagaagaaaattatttttctgaaaaagagaagaaaatgatagac tttgtgcatcaggttgaaaacgtttactcagaatccttccaagaaaataaagagattcaa tctctttccagtttcacgaactggagaaaggaacaagaattttccagacatacagctgtt ttagactcattcctgaattgtgataaacatcaggttcacaatagagaactgagagtgatg tttaactgggctcagtggtgggatgarcttattcaggaaatgattcttctccccagaaaa acacgtgaagaattcaagacctgtaatcctgaggttctttggaggcacctgacagcccag catgattggcgtagtctttgttcatggattgaggaatctgagccccaccagactttgtgt ggaccagttaactggccccttctgactccagacattattgaccgaaacatgttatgtagt ggctacatgagaaatgaaatattagacaaactggctagaaatggaatttttgtcctttct gagttrgaagattttgaacttctgctccaaagattgtcttgccttgggggagtaatgcaa aatcctcaccccgttccaaaatacaatgctgcaagtggtttggacttccatgcttgtttt gtccttcactgtttagaacgtaatttgcagtatctattatacacttacttagactattac agtttaactccttcaaactgtcctattttggataacaaggaattgcatgaagctcatccc tggtttgaatttctcgtgcagtgtcgaggggttgccagtaacccacgagatccaaagatg atttttcaggctagtctagcaaatgctcagatactgattcctagtaatcaagccagtgtg aacagcatgttactggaaggacgtacactattagcactcgcgaccacaatgtatgcacct ggaggtattgatcaggttcttcagaatgaagataaggaaagaactgtaaagaaagttgat cctcagctcttaaaaatggcattggctccttaccccaagctcaaagctgctctctttccc cagtgtacttctcatggaattttgccacctgacatctctctttaccatcttgttcagtca ttagtgccctttgatcccactaaattgtttggctggcagtcaacaaatactcttgcttta tcagatacgtcaagtgactttcctcatttttcttcccctgaactggtgaacaaatatgct gtaatggaacgactggattttttgtactatttgcaccatggacgtccatcatttgctttt ggtacatttttggtccagcagttagtaaggagcaaatgccccaaacagttgattcagcaa gcaggaaatgaagcctatcttttagccctttctttctttcatataccttcaataggagca gcctgtgtttgttttctagaattgcttggtcttgacagcctcaagctcagagttgatatt aaagttgcaaacataattttcaattataaaactagaaaggaagaatctcagcacaatctg ataagagaatcttttgttgawaagttaacaaaattggctgatggtgaaaaagcagcagca gcagaaattcttacctgcttagaagaagccttttgggatacagttgagcatcaaggaata aataagacatctaatgactctagaaggcagtggtctttggtaatgcaattctgcaaactc cataatactagactgagtacatcatacctaaaggaatgtgctaaatccaacgactggctg cagttcatcatccaaacccagctgtacggctaccagccaratgaggtcatttctatcctt caagatttcactcccattttacaagatcacttgacactggcattggagaagttaccgttt ttgtgcyctgacataggaagtcctcagaacagtgctaccagtatgtctgagagcaaaaat gaggatagcctgttccaaatcctttttcaatgtcaggggaattccaacccttcatgttac cttttgactgaaggaatgaggcagcatgctccctttctgagtgtattagcagcatgtttt caagatgccaacattatccagtgcctctgtgtttggataattactactgtggataatgtt accagagctgaagcaacaaaccatattcaaagctcagttgaaaaccatgaatgggatctt catgacctatcagttatctggaaggtgtttttaagaaaagaaaaaagtaaaacacttata aatggcttccagctctttttaaaggattcccctttactctatctcctggagatgtatgaa ctatgtatgaacttcaaaaaatacattgaagctaaaacaaaactggacaagtttcagaca agtctcacagaacttaaaactgcagatgaactaacaccttcacaattacctgtgcaatgg ttggagtcgcaggcattgtttcttcttgaattgatgatgcagcagtgtagaacagaatat gaattaggaaaaatcttacagctgtttgctgcagcaaatgatcttctacttgacggccct tatgtgaagaaactgtgtgcactcagtgagaccctgcaggattcatccatatcaattaat cgcgccatcctaaccagttacaatacagagacatttcagaatgagtgcagatcaattcta gagcagctgcaagagaaaggaatgttctcactggctcggaaggtagcagaattagyggaa ttgcccgtggacaatgtagttacccaggaggttctaagagatctgagtctgttaagaaac actggacagtggcatcaaaaccagacaagaattgaattctggraaaaatgtaatgacagc ttcatgaagaattcaatctccagcaaagctgcatctgatttctttttgaatcaggcagac acagtwtttgaatcttcagctcctgacaagataaacaccattacggagaaacatctgttg cttaccctagctggccattggctagctgagaatgactcagtgtcactggataaattagaa gaaatagagaagcagatctggatttgtcgcatcacacaacaaactttatccacctatgca gggtcaggcaaatcaagcttttctkgccgtgttttagagaacggggatcttacctttgat aacttagctaaggagttttctttttcaaagctgcctgctctgaacacaccaaaatactta aagctrgagggccttgcattcagagaatctcagcagaccctgactaaggatgaggaggaa tcgctcaagtttctaatcggacgccttcttgatgaaggaagtgtgcatgaagccagccga gtttgtcactatttccaattctacaacagagatgtttcactggtgttgcactgcagagct ctggcctcaggggaggctgatctagacaaattagacacagatattcagactctccttgta gcaagagagaagacagatgagaacagcgcatctcagccaagcagaatcccaagcacatca agcttagaagactggacacacattgtggctccttctccagatgatcatgttgttgtcagt ctgaaggctctcatagatgaatgcgtccatggaagaaactactgtagacaggttctctgc ttatatgagctttctaaggaactgaactgctcctacagtgaaatgtcagcccatgaccct gaaaaagtgcttcgagcaattctgtcatcccaccagccagacagatgcaagaaagctcag gcattcatcaccacacagggtctccagcctgaaaccgtggcagagctggcggctgaagaa atcatgcaggaattgttggtgtcttcagaagggaaaggacaaaaacaggtttcgaaccct gcagttgagagtcaggcattcctgcagctggctaagctgtgcaaggatcatacattggtt ggcatgaaattattggataaaatctcttctgtgccatgtggggaactatcatgcattaca gaattgctgattttggcccataattgctttagtttgacttgccatatggaaggaatcacc agagtcctgcaggcagcacggcttctcacagatgaacatttggcacctaatgaagagtat ggacttgtggttcgtcttctaaccggaatcggccgatacaatgaaatgacctacatattt gaattgctgcatgagaaacactactttgaagtgctcatgagaaagaaattagacccaagt gggacactgaagacagctctactagactacatcaagcgttgccgcccaggagacagcgaa aagcacaacatgatagccctttgcttcagcatgtgtcgagaaataggggagaatcatgag gctgctgcttgtatacagcttaagctcattgaatctcagccatgggaggagtctcttcaa gatgtggcaaatttaaagaaactgctgatgaaagctctgactctctttattgatgcagca gaaagttattctaaggactcctgtgtccgccaggccttgcgctgcaagcgactaacaaag ctgataaccctccagctgcattttctgaacaccagtcaacgtactatgctgattaacctg aatagacccaacttgatggattgcatcatgtccttgcctcgattctatcaggctgctatt gtggctgaggcttacgactttgttccagattgggctgaagttctgtatcaacaagtgatc accaagggagacttcaattacttagaagaatttaaacaacaaagactactcaagcccagc atatttgaggaggttgctaagaaagttaaacaccacccacctactgatgctgctctgaaa aatctgaagaaattgcttacttactgtgaagacatctacacatactacagactggcttat gataacaagttctatgatgtggtaaatatgcttctgaaggatgcacagactggctgttgt cttaatgatatgttagcaaactag

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